Pantoea sp. At-9b: Pat9b_1771
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Entry
Pat9b_1771 CDS
T01386
Name
(GenBank) Virulence effector, SrfC
Organism
pao
Pantoea sp. At-9b
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Virul_Fac
Motif
Other DBs
NCBI-ProteinID:
ADU69087
UniProt:
E6WEE7
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Position
complement(1963801..1966164)
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AA seq
787 aa
AA seq
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MRTAKKQPQATLAKRLGLLQETLDGALNWVENQQGHSTRLSMEGDTLSLQLRRARVESHA
LARQLARPVTLALFGQSQAGKAWLLSEMVGDAQGQLMARLGDKTLNYFQHINPGNLDFAI
ATRFSHQRETSSSAWPLEMTLLSEVELIRLMLACATSEPQPDTAAIDSALQRLQRHRQSE
IQPGLESDALVTLWAWSRRHHCHAEVLDRHFWPQAITLAPWLSVDDRVQLFALLWPGQNA
LSESLRSLLHLRHQLRHAPRVLAPLSLLVDDASLPAEKLIASDADLLEMIEVCPIVANRV
GKAQPVPLGLLALLTLEITIPLSSTPRQALYDEADMLELPAPGTPADRGQKEDRLRLQTR
DALRATLLEQKRALLPGWYAARQDIDLLLICTAASQRQDADLASQALREWHLHQAVPASG
EKPRLIWAITPYDARHQQINVDEAVQRQIGQPGQSWGSMLALDRAGVDRMGSWLQDEMQP
DARRDRLALQLSTLQQTLVDRLQPWTEASATPEQAARKQTIADTLLKCLQHRTGLHGELL
ERLQPSRDAVRQLWLSQSNSGTQHKAASAAAEQSYFGIGFEFDLFKDEPVAATEPRNHAG
QRDQQFPQQVFALWLDHLRQLPESRSLLALLNVDKPTLELLVEELITASFRHNMLSILQA
ALNEPDAQASAHEARTDRQVSRAMTVLGDFVAWLGFLQRPESERPASRVNRGQTIFARPP
APSVSFSSGQRLTRLSAAPANHTAYYIYDWLVGLNSVIVENNGYTGGGDLSAAARQTLAM
MLLPLHA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgcaaaaaaacagccacaggccacgctggctaaacgcctcggcctgttgcaa
gaaaccctcgatggcgcactgaactgggtagaaaaccagcagggacattccacgcgtctg
agcatggaaggcgacaccctgagcctgcaactgcgacgcgcccgtgtggagagccacgcg
ctggcacgtcagttagcacgcccggtaacgctggcgttgtttggtcaatcgcaggcgggc
aaagcctggttgctgagtgaaatggttggcgacgcgcaggggcagttaatggcgcgtctg
ggtgacaaaaccctgaactatttccagcatatcaatccgggtaacctggatttcgctatc
gccacccgtttcagccatcaacgtgaaacctcatccagcgcctggccgctggagatgacg
ctgctgagcgaagttgagctgatccgcctgatgctggcctgcgccaccagtgaaccacaa
ccggataccgccgccatcgacagcgcgctgcaacgcctgcaacgtcatcgccagagcgag
atccagccagggctggagagcgatgccctggtgacgttatgggcgtggagtcgtcgtcat
cattgccacgctgaggtgctggatcgccatttctggccgcaggccattactcttgcgccc
tggctcagtgttgatgatcgcgtacagctgttcgccttgctgtggccgggtcaaaacgcc
ttaagtgaaagcctgcgcagcctgctgcatttgcgacatcaattgcgccatgcgccacgg
gtgctggccccgctcagcctgctggtggatgacgcctcactgcctgccgagaaactgatt
gccagcgatgccgatttgctggagatgattgaggtgtgtccgatagtggcaaatcgggtc
ggtaaagcgcagccagtacccttgggcctgttggccttgctaacgctggaaatcaccatc
ccactcagctcaacaccccgtcaggcgttgtacgatgaagccgatatgctggagttgccg
gcacccggtacgcctgccgatcgtggtcaaaaagaagatcgtctgcgcctgcaaacccgt
gacgcgctgcgcgccaccttgctggaacagaaacgcgccctgctgcctggctggtatgcc
gcgcgacaggatattgatctgttattgatctgtactgccgccagccagcgccaggatgcc
gatctcgccagccaggctctgcgcgaatggcacctgcatcaagcggtgcccgccagtggt
gagaagccccggctgatctgggccatcaccccttatgatgcccgccaccagcagattaac
gtcgatgaagcggtacaacggcagattggtcagcccggccagagttgggggtcaatgctg
gcgctggatcgtgcaggcgttgatcgtatgggaagctggttgcaggatgaaatgcagccc
gatgcacgccgcgaccgcctggccttgcagctgagtacgttgcaacagactctggtggat
cgtttgcaaccctggactgaggccagcgccacaccggaacaggcggcgcgcaaacaaacc
atcgccgataccctgctgaaatgcctgcaacatcgtaccggcctgcacggcgaactgctg
gaacgtttgcagccgtcccgcgacgcagtgcgccagctgtggctgagccaaagcaacagc
gggacgcagcacaaagccgccagcgcggccgctgagcaaagctattttggcatcggtttt
gaattcgacttgtttaaagacgaaccggtggctgcgacggaaccgcgcaatcacgcgggg
cagcgtgatcagcagttcccacagcaggtattcgctttatggctggatcatctgcgtcag
ctcccggagagccgcagcctgctggcattgcttaatgtcgataaaccgacgctggaattg
ttggtggaggagttaattaccgccagcttccgtcacaacatgctgagcatcttacaggcg
gcgctgaacgagccggatgcgcaggccagcgcgcatgaagcccgtaccgaccgtcaggtg
tcacgtgccatgacggtgttgggcgattttgttgcctggctgggcttcctgcaacgcccg
gagagtgaacgtccggccagccgcgtcaatcgtggtcagacgattttcgcccgcccaccg
gcccccagcgtcagcttttcatcaggccagcgcctgacgcgcctctctgccgcgcctgcc
aaccatacggcgtattacatttacgactggctggtggggctgaatagcgtgattgttgag
aacaacggttataccggcggcggcgatctgtctgctgccgctcggcagacgctggcaatg
atgttattacctctgcacgcttaa
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