Pantoea sp. At-9b: Pat9b_4731
Help
Entry
Pat9b_4731 CDS
T01386
Name
(GenBank) Integrase catalytic region
KO
K07497
putative transposase
Organism
pao
Pantoea sp. At-9b
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Pat9b_4731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_2
HTH_21
rve_3
HTH_28
HTH_23
DUF4159
HTH_Tnp_1_2
DUF6262
DUF2992
P22_Cro
TSC22
DUF4140
Motif
Other DBs
NCBI-ProteinID:
ADU72067
UniProt:
E6WKY2
LinkDB
All DBs
Position
pPAT9B02:complement(15592..17124)
Genome browser
AA seq
510 aa
AA seq
DB search
MHSYEDRIRAVELYYRYGKRLTVVVRKLGYPSVKQLSRWVRIYEEAGDLPRELKPRKRYS
HAQKVAAVEHYLTHGGCLAFTRRAIGYPSSEVLKSWIEEIYPGRRPLIIRSNTNKCFSPE
ERTQAVRELCTRRGTALKVAQKIGISVPVLYKWKKDLIDDEAYQSMRKRKPASQDKQQDA
LRDEIKQLKQQVHQLQLERDILTKANELIKKDMGISVLTLKNREKTRLVDALKEIYPVAE
LLSALHLARSCYFYHKASLRLHDKYAKIRVTMAKIFEGNYRCYGYRRLHAMLRENNTYIS
EKVVRRLMAEEQLIVKRAGRRRYSAYCGEIGQAPENLLARNFRSGRPNEKWLTDITEFHL
PAGKVYLSPVIDCFDGKVVSWAIGTRPDAKLVNAMLDDAIDTLSENERPVIHSDRGSHYR
WPGWLDRINGSGLIRSMSRKGGSSDNAACEGFIGRVKNEMYYGRNWASTTLEDFMCFLDR
YIRWYNESRIKISLGAMSPVKYREHLGITT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcactcatatgaggaccggatccgggctgttgagctttattatcgatatggtaaaagg
ctgacagttgttgtccgaaagttgggctatccatccgttaaacagctttcccggtgggtt
cggatttatgaagaggccggtgacttacccagggaattaaagccaagaaaacgctattca
cacgcacagaaagtcgccgcggttgagcattatcttacgcatggtggttgcctggccttc
acgcgtcgcgccattggctatcccagtagcgaagtgctgaagagctggatcgaagagatt
tatccgggacgacgcccgctgattattcgttcgaatacaaacaaatgcttcagcccggag
gaaagaacgcaagccgtccgcgagctttgcacccgacgtggaaccgcccttaaagtggca
caaaagataggtatcagcgtcccggtcctgtacaaatggaagaaagacctgatcgacgat
gaggcttatcaatccatgcgtaaacgtaaaccagcttctcaggataagcagcaggatgca
ctgcgcgatgaaataaagcagcttaaacagcaggttcatcagctacagcttgagcgtgac
atcctgacaaaagcgaatgaactgataaaaaaagacatgggcatcagcgtcctgaccctg
aagaacagggagaagacccgactcgttgatgcccttaaggaaatctatcccgttgctgaa
ctgctcagtgctctgcatcttgcccgtagttgctatttttatcacaaagcaagcctgcgt
ctgcatgacaagtacgcgaaaatacgtgtaaccatggcaaagatctttgagggaaattat
cgctgctatggctaccggcgtctccacgcgatgctccgtgaaaacaacacgtatatctca
gaaaaggtcgtccgcagactgatggctgaagaacagctgattgtcaagcgtgccgggcgg
cggcgatacagcgcttactgcggagaaatcggtcaggcacccgaaaatctcctcgccaga
aattttcgctccggcaggccaaatgagaagtggctgactgatattaccgagttccacctt
ccggcaggcaaggtctacctgtcgccagtcatcgactgttttgatggcaaagtggtgagc
tgggccatagggacacgtccggatgcaaaactggtaaatgccatgctggatgatgcgatc
gatacgctcagcgaaaatgaaagaccggtgatacacagcgaccggggcagccattaccgg
tggccgggctggctggatcgtatcaacggatcgggtcttataaggtccatgtcgcgcaag
ggtggctcgtcggataatgcggcgtgcgaaggcttcatcggacgggtcaaaaatgaaatg
tactatggcagaaactgggcgagcacaacgctggaagattttatgtgcttcctggacagg
tacatacgctggtataacgagagtcgaatcaaaatatcattaggtgcaatgagtccggtg
aagtaccgggagcatctggggatcacaacatag
DBGET
integrated database retrieval system