Pantoea ananatis PA13: PAGR_g1142
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Entry
PAGR_g1142 CDS
T01970
Name
(GenBank) putative transglycosylase YfhD
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
paq
Pantoea ananatis PA13
Brite
KEGG Orthology (KO) [BR:
paq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paq01011
]
PAGR_g1142
Enzymes [BR:
paq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PAGR_g1142
Peptidoglycan biosynthesis and degradation proteins [BR:
paq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PAGR_g1142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AER31668
LinkDB
All DBs
Position
complement(1217626..1219083)
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AA seq
485 aa
AA seq
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MKRLKFNYLVIGLLTVLLALALWPSIPWYGGGQDTISQIKSRGVLRVSTVNSPLTYYTVN
KAPAGMDYELAKRFADYLGVKLDITVRANLSDLFDALDDGKADLLAAGLIYNDERLSRYQ
IGPGYYSVSQQLVYRVDKPRPKNLGDLKGRLVVASGSAYLSTLKNARANHYPDLDWAIST
DQSPKALLEAVAEGKLDYTIGDSVTIALLQRIHPQLAVAFDVTDEEPVTWYLPHESDDSL
NAAMLDFFNSMGEEGAMARLEEKYLGHVGTFDYVDTRTFLRSIDNVLPDIKPLFEKYAKN
IDWRLLAAISYQESHWNPQATSPTGVRGMMMLTRNTADSVDVGDRTDPEQSIRGGSEYLQ
NMMEKVPQTIPEDERIWFALAAYNMGYAHMLDVRKLTAKQGGNPDSWADVKLRLPMLSQK
RYYSQTTYGYARGQEAYNYVENIRKYEISLVGYLQEQEKRIAQQAALEAELGKGYPAVTP
EVAMN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcctaaaatttaattatctggttatcggtctgcttaccgtgctgctggctctg
gcactgtggccgtctattccctggtacgggggaggacaagatacgatttcacagattaaa
tcacggggagtgctacgcgtcagtaccgtaaactcgccgttgacttactacaccgtgaat
aaagcaccggccgggatggactacgagctggcgaagcgttttgccgattatctgggcgtt
aagcttgatataacggtgcgcgccaacctcagcgatctgttcgatgcgctcgacgacggc
aaagcggatctgctggcggcaggtctgatttataacgatgagcgtttgtcgcgttatcag
atcggtccgggctactacagcgtttcgcagcagctggtctatcgcgtggacaaaccgcgg
ccaaaaaacctgggtgacttaaaggggcggctggttgttgcctctggatcggcttatctg
tcgacgcttaaaaacgcccgggcgaatcactatcccgatctcgactgggccatttcgacc
gatcaaagtccgaaagccctgctggaagccgtggcggaaggcaagctggattatacgatt
ggcgattccgtgacgattgccctgcttcagcgcattcatccccaactggctgtggctttc
gacgtcaccgatgaagaaccggtaacgtggtatttaccgcacgaaagcgatgacagcctg
aacgccgccatgctggatttctttaacagcatgggagaagaaggggcgatggcaagactt
gaagagaaatatctcggtcacgtcggcaccttcgactacgtggatacccgcaccttcctg
cgctccattgacaacgtgctgcccgatataaaacccctgtttgaaaagtacgccaaaaat
atcgactggcggctgctggcggcgatctcctatcaggagtcgcactggaatccgcaggcg
acgtcgcctaccggcgtccgcggcatgatgatgttaacgcggaataccgctgacagcgtt
gacgtaggtgaccgtaccgatcctgagcagagcatccgtggcggcagcgagtatctgcaa
aacatgatggaaaaggtgccacaaacgattccggaagatgagcgtatctggtttgccctg
gcggcctataacatgggctatgcgcatatgctggatgtgcgtaagctcacggctaaacag
ggtggaaatcccgacagctgggcagatgttaaactgcggctacccatgttgagccagaag
cgctactactcacaaaccacctatggctatgcacgcgggcaggaagcctataattacgtg
gagaatatccgcaaatatgaaattagcctggtgggttatttgcaggagcaggaaaaacgc
attgcccaacaggcggccctggaggcagagctgggcaaaggttatcctgccgtcacgcct
gaggtggcaatgaattaa
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