Psychrobacter arcticus: Psyc_0003
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Entry
Psyc_0003 CDS
T00256
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
par
Psychrobacter arcticus
Pathway
par03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
par00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psyc_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
par03400
]
Psyc_0003 (recF)
DNA repair and recombination proteins [BR:
par03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psyc_0003 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_27
AAA_13
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AAZ17877
UniProt:
Q4FVT1
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All DBs
Position
3463..4677
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AA seq
404 aa
AA seq
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MIERLQISYLRNLTPINLAPAACNVIIGANGSGKTSLLEGMFLLSRGKSFRHNQPKRYIQ
HHKDAATVHAKLSDGRTLAIQKQADATTILRLNQTTVYNQSILTEQLPTLLIDPSTMDML
EQGSASRRQLLDWLVFHMKQGFHPQWIAYQRLLKQRNSLLKQRRHLTHVQLAELRAWDKG
LASHAALIHHYREAIFEAWQPYFSESIAQLLPAYAEQLSLSYNAGYDTSVALDIQLNERL
DQDLQLGYTRIGNHRADIHVHWRSIRPIHKANEHLNSPLAAAADSTFKLPILKEQAANIL
SRGEKKLLITALRLSQLPLLLNTGNDLEASVNDAKLSATPVVLLDDITAELDDRAIEILL
STLAQLPCQVFMTSLTDSILPLVYEYWEKPQVFHMKQGSILPAQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgtctacaaatctcatatttgcgtaatttaacgcccatcaatttagcacct
gctgcttgcaacgtcattatcggcgctaatggcagcggtaaaacctcgctacttgaaggt
atgtttttgctatcaagaggtaagagtttccgccacaatcagcccaaacgctatattcag
catcataaagacgccgcaactgtacatgctaaacttagtgatggccgtactttggctatc
caaaagcaagcagacgctacgacaattttacgtctcaatcaaaccacggtatacaatcaa
agtattttaacggagcagcttcctaccttgcttatagatccatcgacgatggacatgcta
gagcagggcagtgccagtcgtcggcagttattagattggttggtgtttcacatgaaacaa
ggttttcatccacagtggattgcgtatcagcgcttattaaaacagcgcaatagtttactc
aaacaacgacgtcatttgactcacgttcagcttgctgagcttagagcttgggacaaagga
cttgccagtcatgcagcgctgattcatcactaccgtgaagctatatttgaagcttggcaa
ccttatttttctgagagcattgcacagttattgcctgcttatgctgagcaattaagcttg
agctacaatgcgggctacgatacgagtgtagcgctcgatatacagcttaatgagcgctta
gatcaggatttacagttgggttatacgcgtattggtaatcaccgcgctgacatccatgtg
cattggcgctctataagaccaatacataaggctaatgagcacctaaactcacctttagca
gcagcagcggattcgacttttaagttacctattttgaaagagcaagcggccaacattttg
tctcgtggagagaaaaaattgttgattacggcattgcgcttatcacaattaccacttttg
cttaacactgggaatgatctagaggcatctgttaatgacgctaaattaagcgctacacca
gtggtattactagatgatatcaccgcagagctggatgatagggcgatagagattttatta
tcaaccttagcacagttgccatgccaggtatttatgaccagtttgaccgatagtatttta
cctttagtgtatgagtattgggaaaaaccccaagtgtttcacatgaaacaaggtagtatt
ttaccagctcagtag
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