Paraburkholderia aromaticivorans: CJU94_15290
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Entry
CJU94_15290 CDS
T05169
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03030
DNA replication
parb03430
Mismatch repair
parb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJU94_15290 (holB)
03430 Mismatch repair
CJU94_15290 (holB)
03440 Homologous recombination
CJU94_15290 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parb03032
]
CJU94_15290 (holB)
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_15290 (holB)
Enzymes [BR:
parb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJU94_15290 (holB)
DNA replication proteins [BR:
parb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJU94_15290 (holB)
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJU94_15290 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
ASV99391
UniProt:
A0A248VLJ7
LinkDB
All DBs
Position
1:complement(3375651..3376685)
Genome browser
AA seq
344 aa
AA seq
DB search
MIYPWQADDWNRLQQLRGHWPHALLLHGQAGIGKLRFARHLAQGLLCEAQQANGEPCGAC
VACNWFAQGNHPDYRIVVPEALAAEAGLNNGADEKADKADADEGKKTRTPSKEIKIEQIR
GLLDFVGVGSHRGGARVVVLYPAEGLNIAAANALLKTLEEPPAGVVFLMVSARIDRLLPT
IISRCRQWPMTMPAPDVATKWLAAQGVAEAPALLAEAGGAPLTALALASDENRALRDWTL
KQLAAGPACDAFACGEALQKLPVPLVLGWLQRWMYDLLAQRTAGTPRYFPQASAALTRCA
SQADAGAFARFMRAVTRQRAVESHPLNARLVFEELFLGYRELFA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccgtggcaagccgacgactggaaccgcctgcagcaactgcgcggccactgg
ccgcacgccctgttgctgcatggacaggcgggcatcggcaagttgcgcttcgcgcggcat
ctcgcgcaaggcctgctgtgcgaggctcagcaagccaacggcgagccgtgcggggcgtgc
gtggcctgcaactggtttgcgcaaggcaatcatccggactaccggatcgtcgtgcccgag
gcgctggccgccgaagcgggcctgaacaacggggcggacgaaaaagccgacaaggccgat
gccgacgaaggcaagaagacccgcacgccgagcaaggaaatcaagatcgagcagattcgc
ggcttgctcgacttcgtcggcgtgggttcgcaccgcggcggcgcccgcgtggtcgtgctg
tatccggcggaagggctgaatatcgccgcggccaacgcgctgctgaagacgctcgaagag
ccgcctgcgggcgtcgtgttcctgatggtgtcggcgcgtatcgatcgcctcttgcccacc
atcatcagccgctgccgccagtggccgatgaccatgcccgcgccggacgtggcgacgaag
tggctcgccgcgcaaggtgtggccgaagcgcctgcgctgctcgcggaagccggcggcgcg
ccgctcacggcactggcgctcgccagcgacgaaaaccgcgcgctgcgcgactggacgctc
aaacaactggccgccggcccggcctgtgacgccttcgcctgcggcgaggcgctgcagaag
ctgcccgtgccgctggtgctgggctggctgcaacgctggatgtacgatttgctggcgcag
cgcacggcgggcacgccacgttactttccgcaagcgtcggcggcgctgacacgctgtgcg
tcgcaagccgacgccggcgcgttcgcgcgcttcatgcgcgccgtgacgcgccagcgcgcc
gtcgagagccatccgctgaatgcgcggctggtattcgaggaactgtttctcggctaccgc
gagttgttcgcgtaa
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