Pyrobaculum arsenaticum: Pars_2346
Help
Entry
Pars_2346 CDS
T00503
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pas
Pyrobaculum arsenaticum
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pas03019
]
Pars_2346
03009 Ribosome biogenesis [BR:
pas03009
]
Pars_2346
04131 Membrane trafficking [BR:
pas04131
]
Pars_2346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pas04147
]
Pars_2346
Messenger RNA biogenesis [BR:
pas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pars_2346
Ribosome biogenesis [BR:
pas03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pars_2346
Membrane trafficking [BR:
pas04131
]
SNARE
SNARE associated proteins
Others
Pars_2346
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pars_2346
Exosome [BR:
pas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pars_2346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_22
TIP49
AAA_5
AAA_33
AAA_14
AAA_2
UFD1
AAA_28
IstB_IS21
Vps4_C
AAA_18
nSTAND3
Mg_chelatase
RNA_helicase
AAA_24
DUF815
Sigma54_activat
PhoH
AAA_7
Zeta_toxin
AAA_17
Parvo_NS1
TsaE
ATPase
AAA_19
ABC_tran
bpMoxR
AAA_30
AAA_25
SLFN-g3_helicase
PduV-EutP
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ABP51889
UniProt:
A4WNC2
LinkDB
All DBs
Position
2096549..2098744
Genome browser
AA seq
731 aa
AA seq
DB search
MSEWIELRVLESKARDANRPVVRIDPEVMERTGIAVGDVIEIVGRRRTAAKVWNGLPEDR
GKGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLR
EYVVVEGDMLQIYVLSQPLTFQVVQTKPSNAILIITEDTQIQIFEKPVSGVKIPHVTWED
IGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAY
FVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVV
AQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPDFKGRYEILQIHT
RNMPLAPDVDLRKLAEITHGFSGADLAALAREAAMSALRRAIQSGLIDLNQPSIPPEVFE
QIKVTMADFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPEKF
KKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIF
RKARMAAPAVVFIDEIDALATARGFGGDSLVSERVVAQLLAEMDGIKALENVVVIAATNR
PDLVDPALLRPGRFDRIIYVPPPDYKARLDILLIHTRATPLAKDVGLEELARRTEGYSGA
DLELLVREATFLALREDINAKEVSMRHFEEALKKVRPSVAPDMLKFYETWLEKARQLTVS
PKAKATPPLYL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaatggattgagcttagggttcttgagagtaaggctcgggatgccaataggccc
gtggttaggattgatcctgaagtgatggagagaacggggattgctgttggcgatgtgatc
gaaatagtggggaggaggaggacggccgccaaggtgtggaacggcttgcctgaggatagg
gggaagggcgtcataaggatgaacagcatattgaggaaaaacgccgatgtttcacttaat
gagactgttaaggttaggcgggtcgagccgaagccggcggcttttgtaaagctggcgcct
gtatctatgacaatcgcagttgatgctaactttctacaatatatcaagcagaggctgagg
gagtacgtggttgtggagggcgacatgttgcagatatacgtgctgagccagccccttacg
ttccaagtagtgcagacaaagccttccaacgctattcttataattaccgaagacacgcag
atccagatatttgaaaagcctgtctccggcgtcaagatacctcatgtcacttgggaggat
attggtgatttggaggatgctaagcagaagattcgggagcttgtggagcttcctcttcgt
cacccggagctttttaagcatttgggtattgagccgcctaagggtattctgttaattggc
cctcccggtactgggaagacgcttttggcaaaagccgttgccaacgaggccaacgcctac
ttcgtagccataaatgggccggagattatgtctaagtactacggcgagagtgaggctagg
ctgagggagatattcgaagaggctaagaaaaacgccccggcgataatcttcatcgacgaa
atagacgccatagcccccaagagggaggaggtgacgggcgaagtggagaagagagtagta
gcccagctgttgacattaatggacggactacaagaaagaggccaagtagtagtcatagga
gccaccaacagaccagacgcagtagacccagcactaagaagaccaggaagattcgacaga
gagatttggattaatccgccagatttcaaggggaggtacgaaattctgcaaattcatacc
cgcaacatgccgctggcgccggatgttgacttaaggaagttggctgagatcacacatggc
ttctctggagcagatctcgccgcgttggcgagagaggctgcgatgtcggcgttgaggagg
gcaattcagagtgggcttattgatctgaaccagccgtcgataccgcctgaggtgtttgaa
cagattaaggtcaccatggcggatttcaccagcgcgctgagggagattgtgccctctgcg
ctgagggagatacatatcgaggtgccgagagtgaggtgggaggatgttggcggcttggag
aacgtgaagcaagagcttagggaggctgtggagtggccgcttaaatatccggaaaagttt
aagaagttcggccttaggccgccgaaggggattctgctctttgggccaccaggtacgggg
aagaccctactcgccaaggcggtggccacggagtcgggggccaacttcatagccgttagg
gggcctgagatcttctctaagtgggttggcgagagcgagaagatggtgagagagatattt
aggaaggcgcgaatggcggctcccgctgttgtttttattgacgaaattgatgccttggcc
actgcaagggggtttggcggggattccctagtcagcgaacgcgtagtggctcaactattg
gcggaaatggatggcataaaggcgttggagaacgtagtcgtcatcgcggcgactaatagg
cctgatttagtagacccggcgttgctgaggcctgggcgcttcgacaggattatatacgtg
ccgccacccgattacaaggcgcggcttgacatattactaatacatacgagggccacgccg
cttgccaaggacgtaggcctagaagaactagccaggaggaccgagggatattcgggcgcc
gatctagagcttctggtgagagaggccaccttcttggcgttgagagaggatataaacgcg
aaggaggtgtcaatgagacatttcgaagaggcgttaaaaaaggtgaggccctcagtggct
cctgacatgcttaagttctacgagacttggctagagaaggcgaggcaacttacggtgtct
cccaaggctaaggcgacgccgcctctgtacctatga
DBGET
integrated database retrieval system
