Pseudomonas asgharzadehiana: KSS96_22055
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Entry
KSS96_22055 CDS
T07697
Name
(GenBank) leucine-rich repeat domain-containing protein
Organism
pasg
Pseudomonas asgharzadehiana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
QXH66270
LinkDB
All DBs
Position
4876875..4881923
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AA seq
1682 aa
AA seq
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MASAVIQSVIQATRIAPAGVHTTLPSWLGNASAAKRQALKATPMVFADWHATTSRERQAP
LKLALATNWNAHNQVDSALATLQTPQQFAAPLLQQALKQRFGLDADVTTTYLRLYTPLTT
PLLPVPTGGAKVWTVSLLSAALHNFDAAESQPHAYTNDSTFITQPSATGQFDTLPSFASK
VSIRQFIQLCRELDIGARYQRYLKRFFGFEDATVKATLRDTLIQSLKAEANTSLHMARLK
KDVSDAAFYTLQGQLEGLRGMMLEGKLLLSHDLSLMAAPLTGIVLFAADLEAHHDSTPVV
AYIPGDPQAPLKYYPNGTAFMLDLTSKLRSADYQKFFCRFVKQEHRGYFFADLNNRLSQV
AWHKPKPGDPRPAWREKPVAEPNLQFFATKISGGLYEHLYENKLNQLLNDARVTAVSSAD
ADRQARWQRWSIVQKVAKAILEVAAFIATPFIPPLGALMLGYTAFQLLDDTFEGILDWAE
GLKRQAFGHLMSILEQMVQLGMFAVGAPIAESLLRQALPQPLWDFFDTLHPVSGEDGKTR
RWKPDLTPYAHDITLAAESSANPEGLHTHQGKQILALDGKHFAVEQRAGHAFMQHPTRPH
AYRPRIMGNGAGAWVTEVDQPLSWDRATLLRRQGPLAEHLSDARLEEARLISGTDEPALR
KQFMDRQPPPPLLADALKRVTLDQQLQDFIDQMNSDDPELFQKADSQTQLWLLSNTALWP
ASKTLRFLDAEGRTLWELKGKENAAVVQVHQAQLKNGDLLKTLLETLDEPERKILLEEEF
GAAVTQPHVRAAKLRKRLARKAEEKRFALFDARYRGQEVTHDPRVQKIIDTTPGLPTSTA
EEVLREATGQELLEIDQGSLPATLTERARWAAHQVRISRAYEGLYLDSVDSSDTHRLALH
TLQKLPGWSPQVRLVVTDYSRTGRVRDSIGTPQAPIQRTLVRTAEGAYVPENGEGTLFGE
TDFYTAVLQALPDAQRDALGMQIGQGRLLRQTLRQHALTREEVGTLLAEMPVRKPLYDPK
LMRLPGGMEGYDRTSPTPGPSGQPSLEDRLRDLYPSLNPEEVRNVLEAMRAQAGPPLLTL
QSVKRELLRLQADLATWLHNTPQTFLDTQIPLSRAVITAERHNRARWVEEIVHAWRHETP
SDSHFPNPDDNGLTLRLTQPIYGELPKLSANFDHISYLELNSYVSTRGTPAFLAQFPKLR
SLNIHGIALRTLPTEVTSQPHLNDLTLRNTAIKLTAQSRENLASLRGLKTLDLSSNPLTL
APNLEHMTDLQLLNLSHTEIAQAPQGLTDLPHLIDASLSDNQFQALPDALFTLPAERAKA
FDFSGNPLSRATLERVKTYCQQTGEHFGADAGLEERRRVHELYPTFTDREASQFIFKLPR
SLDDAMATLTDMKADYERLQTDLEQWAVEVPERHPVTHAPLDTRTRAQQQITRRAFKTLL
QDCWRRETALYADHESPRDTHELVSTHAILGDLPALNVSFNHVARIELVGEHHTSIPPGF
LKRFPQLESLLVHRYALPDIPLEVFNLAKLRSLSLTFSGLRLSPASADALSGLEHLNYLD
LSENPLGITPNVRLMTGLSTLMLSNAGLTEAPAGAFNLPLLDQLDLSDNQITELPSDILE
ITPDLADGFDLNGNPLSPATIAMLRPYYRRHAVDFGVVEVTLDPQMNPLAASPDVSEEEM
EQ
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctgtcattcaaagcgttatccaggccacacgcatcgcgcccgccggtgta
cacacaacgctgccaagctggctgggaaacgcctcagccgccaagcgccaggcattaaaa
gccacaccgatggtatttgccgactggcatgccaccaccagccgcgaacggcaggcgccg
ctcaaactggcgctggcgacgaactggaacgcgcacaatcaggtggacagcgccctggcg
acactccagaccccgcaacagttcgccgcgcccctgctgcagcaagcgctcaagcaacgg
ttcggcctggacgccgatgtaacgaccacctacctgcgcctgtacacaccgctgacgacc
ccgctgctgcccgtgccgaccggcggcgcgaaagtctggaccgtgtcgctgctttcggcc
gcgctgcataacttcgacgcggccgaaagccagccgcacgcttacacaaacgactcaacc
tttatcacccaacccagcgccaccgggcagttcgacacgttgccctcgttcgccagcaag
gtcagcatccgacagttcatccagctgtgccgcgagctggatatcggcgcgcgctaccaa
cgctacctcaagcgctttttcggcttcgaagacgccaccgtcaaggccaccctgcgcgac
acgctgatccaaagcctcaaggccgaggccaacaccagcctgcatatggcgcgcctgaaa
aaagacgtgagcgacgccgccttttacacccttcagggccaactcgaaggcctgcgcggc
atgatgctggaaggcaaattgctgctcagccacgacctgagcctgatggcagcgccgctg
accggtatcgtgctgttcgccgccgacctggaggcgcaccacgattcaacgcccgtggtg
gcttacatccccggtgacccacaggcgccgctcaagtactaccccaacggcacggcgttc
atgctcgacctcacctcgaagctgcgcagcgccgactaccagaagttcttctgccgcttc
gtcaaacaggagcaccgcggctattttttcgccgaccttaacaatcgcctgtcgcaagtg
gcctggcacaagcccaaacccggcgacccacgaccggcctggcgcgaaaagcccgtggcg
gagcccaacctgcagtttttcgccaccaagatcagcggcggcctgtacgaacacctctac
gaaaacaaactcaaccagctgctcaatgacgcacgcgtgaccgccgtgtccagcgccgac
gccgatcgccaggcgcgctggcaacgctggagcatcgtgcaaaaagtcgccaaggcgatt
ctcgaagtggcggcctttatcgccacccccttcataccgccgctgggggcgttgatgctc
ggctataccgccttccaactgctcgacgacaccttcgaaggcatcctcgattgggccgaa
gggctcaagcgccaggccttcggccacctgatgtcgatccttgaacaaatggtgcaactg
gggatgttcgcggtgggcgcgccgattgccgaaagcctgctacgacaggcgctgccccag
ccactgtgggattttttcgacacgcttcacccggtcagcggcgaagacggcaaaacccgc
cgttggaagcctgacctcacgccctacgcccacgacatcaccctggctgccgaatcatct
gccaaccccgaagggctgcacacccaccaaggcaaacagatcctggcgctcgacggcaaa
cacttcgccgttgagcaacgcgccggccacgcattcatgcaacacccgacccgcccgcac
gcctaccgcccccggatcatgggcaacggcgcgggcgcctgggtcaccgaagtggatcag
cctttgagctgggaccgcgccaccctcctgcgccgacaaggcccactcgccgagcacctc
agcgacgcacgcctggaggaggcgcggctgatcagcggtaccgatgaaccggccctgcgc
aagcagttcatggaccgccagccaccgccgcccctgctagccgacgcactcaagcgcgtc
accctcgaccaacaactgcaagacttcatcgaccagatgaacagcgacgaccctgagctg
tttcaaaaagccgattcacagacccaactctggttgctcagcaatacggccctgtggcct
gcatccaaaaccctgcgctttctcgacgccgaaggccgcacgttgtgggaactcaaaggc
aaggaaaacgccgcagtggtgcaggtccaccaagcgcagttgaaaaatggcgacctgctc
aagaccctgctcgaaaccctcgacgaacccgaacgcaaaatcctactggaagaagagttt
ggcgcggccgtcacacagccccacgtgcgcgcggccaaactgcgcaaacgcctggcgcgc
aaagccgaggagaaacgctttgccctgtttgacgcgcgttatcgcggccaggaggtcacc
cacgaccctcgcgtgcaaaaaatcatcgacaccacgcccggcctacctaccagcaccgcc
gaagaggtgttgcgcgaagcgaccggccaggagctgctggaaatcgaccagggcagcctg
cccgcaaccttgacggaacgtgcacgttgggcggcgcaccaagtcaggatcagccgcgcc
tacgaagggctgtacctggactcggtggacagcagcgacacccatcgccttgccctgcac
accttgcaaaagctgccgggctggtcgccccaggtgcgcctggtcgtcaccgactactcg
cgcacaggccgcgtgcgcgactcaatcggcacgcctcaagcgccgatccaacgtacgttg
gtgcgtacggccgagggcgcttacgttccagaaaacggcgagggcacgctctttggagaa
accgacttctatacagcggtgctccaggcactccccgacgcccagcgcgacgcgctgggc
atgcagatcggccaaggccgattgctgcgccagaccttgcgccaacacgcgctgacgcgc
gaagaggttggcacgctgctcgccgagatgcccgtgcgcaagcctctttacgacccgaaa
ctgatgcgcctgccagggggcatggaaggctatgaccggacctcacccacgcctggcccc
agtgggcaaccgtcgctggaagatcggctgcgcgatctttaccccagcctgaacccggaa
gaagtgcgcaatgtgctggaagccatgcgcgcccaagcgggtccgccgttgctgacgctg
caatccgtcaaaagagaattgctgagattgcaagccgacctggcgacctggcttcacaac
acgccgcagacgttcctcgatacgcagatccccctgagccgcgcggtgatcacggccgag
cggcacaatcgagcgcggtgggtagaagaaatagttcacgcctggcgccatgaaaccccg
tccgatagccatttccccaaccccgatgacaacggcctcacgctgcgcctcacccagccg
atctatggcgaactgccaaaactgagcgccaacttcgaccacatctcctacctggaattg
aacagctatgtgtccacccgaggcacaccggcgttcctggcccaattccccaagctgcgc
agcctgaatatccacggcatagccctgcgaacactgcccaccgaggtaacgtcgcaaccc
catctcaatgacctgacactgcgcaacacggccatcaagttgaccgcgcaaagccgtgaa
aacctggccagcctgcgcgggttaaagaccctcgacctgtccagcaacccgctgacgctg
gcgcccaaccttgaacacatgaccgacttgcagctgctgaacctgagccacacagagatt
gcccaagcgccccaaggcctgacggacctgccccacttgatcgacgccagcctcagcgac
aaccagtttcaagcactgcccgatgccctctttacgttgccggccgaacgcgccaaggcc
tttgatttttccggcaacccgctctcgcgggccaccctggagcgggtcaaaacctattgc
cagcaaaccggcgaacacttcggcgcggatgccggccttgaagagcggcgccgggtccat
gagctctaccctaccttcaccgacagggaggccagccaatttatcttcaagctgccgcgc
agcctggacgacgcaatggctaccctcaccgacatgaaagcggactacgagcgcctgcaa
acagaccttgagcagtgggcggtggaagtccccgagcgacaccccgtcacccacgccccc
ctggacacccgaacgcgcgcgcaacagcaaatcacacggcgggcgttcaagacgttgctg
caagactgctggcgccgggaaaccgccctgtacgcggatcatgagtcgccgcgagacact
cacgaactggtcagcacccacgcgatcctgggggatttgccggcactgaacgtgagcttt
aaccatgtcgcgaggattgaactggtgggcgagcaccatacgtcgatcccgccgggcttc
ctcaagcgcttccctcagcttgaaagcttgctggtgcatcgctacgcattgccggacatc
ccactggaggtgttcaacctggccaagctcaggtcgctgagcctgacgttcagcggcctg
cgcctgagccctgccagcgccgacgcgttaagcggcctggagcaccttaactacctggac
ctgagcgaaaacccgctgggcattacaccgaacgtacgcttgatgaccgggctctcaacg
ctgatgctctcgaatgccgggcttaccgaagcccccgcgggcgcattcaacctgccgctg
ctcgatcaactggatttgagcgacaaccagatcaccgagcttcccagcgacattcttgaa
atcacgcctgacctggccgatggcttcgatctgaatggcaacccactctcacccgcgaca
attgccatgctgcgcccttactaccgacgccatgcggtggactttggcgtagtagaagtc
acgctggacccgcagatgaacccgcttgctgcgtcacccgacgtgtccgaggaggaaatg
gaacaatag
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