Paraglaciecola sp. T6c: Patl_2493
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Entry
Patl_2493 CDS
T00372
Name
(GenBank) integration host factor, alpha subunit
KO
K04764
integration host factor subunit alpha
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pat03032
]
Patl_2493
03036 Chromosome and associated proteins [BR:
pat03036
]
Patl_2493
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_2493
DNA replication proteins [BR:
pat03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Patl_2493
Chromosome and associated proteins [BR:
pat03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Patl_2493
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Patl_2493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Phage_Mu_Gam
Meth_synt_1
Motif
Other DBs
NCBI-ProteinID:
ABG41009
UniProt:
Q15SX9
LinkDB
All DBs
Position
complement(3025779..3026075)
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AA seq
98 aa
AA seq
DB search
MALTKAEMAEHLFEKLGMNKRDAKDLVEAFFEEVREALESGEQVKLSGFGNFDLRQKSER
PGRNPKTGEDIPIKARRVVTFRPGQKLKSRVENTKPTE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaccaaagccgaaatggcggaacatttatttgaaaagttgggcatgaacaag
agagatgccaaagatcttgttgaagcatttttcgaagaggtccgtgaggcattggaatca
ggtgagcaagttaagctatctggttttggtaactttgatttacgacaaaagagtgaacga
ccagggcgcaaccctaaaacgggtgaagatatccctattaaggcgagacgcgtagtcaca
tttcgacctggtcaaaagctcaaaagccgcgtagagaatacaaaaccgactgagtaa
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