Pseudomonas atacamensis: JWU58_05685
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Entry
JWU58_05685 CDS
T07336
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00470
D-Amino acid metabolism
pata00550
Peptidoglycan biosynthesis
pata01100
Metabolic pathways
pata01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWU58_05685
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWU58_05685
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JWU58_05685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pata01011
]
JWU58_05685
Enzymes [BR:
pata01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JWU58_05685
Peptidoglycan biosynthesis and degradation proteins [BR:
pata01011
]
Precursor biosynthesis
Amino acid ligase
JWU58_05685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
TTL
ATP-grasp_5
GARS_A
ATPgrasp_YheCD
FOG_N
Motif
Other DBs
NCBI-ProteinID:
QSL88778
LinkDB
All DBs
Position
1219164..1220138
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AA seq
324 aa
AA seq
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MTAAYAKLFSTIAPKDFGRVAVLFGGLSAEREVSLKSGNAVLEALQSAGVDAFGIDVGED
FLQRLLSEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLCSEADCISAATELGLPLIVKPAHEGSSIGMAKVNSASQLIDAWKAAST
YDSQVLVEQWIQGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYIANDTQYRIPCGLDAA
KEQELMELTAKACEALGIAGWGRADVMQDADGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAASVEDAGVTEARG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaagctgttctccaccatcgcgccgaaagacttcggccgcgtc
gccgtgctcttcggcggcctgagtgccgagcgtgaggtttcgctgaaatccggcaacgcc
gtgctcgaggcgctgcaaagcgctggcgtcgacgcgttcggcatcgatgtgggcgaagac
ttcctgcagcgtctgctcagcgaaaagatcgaccgcgcgttcatcattctccacggtcgc
ggcggtgaagacggcagcatgcagggcctgctcgagtgcgccggcatcccttacaccggc
agcggcattcttgcttccgcactggcgatggacaagctgcgcaccaagcaggtctggcac
agcctcgggattccgacgccgcgtcacgccgtactgtgcagcgaagccgattgtatttcc
gcagcgacggaactgggcctgcctttgatcgtcaaaccggcgcatgaaggttcaagtatc
gggatggccaaagtgaattctgcgtcccagttgatcgacgcatggaaagcggccagtacc
tacgattcgcaagtgttggtcgagcaatggattcaaggtccggagttcaccatcgccacc
ctgcgtgaccaggtgttgcctcctatcgccctgggtacaccgcacacgttctacgactac
gacgccaagtacatcgccaacgatacccagtaccgcattccgtgcgggctcgacgcggcc
aaggaacaggaactcatggaactcacggccaaggcctgtgaggcgctgggtatcgccggt
tggggccgggcggacgtgatgcaggacgccgacgggcagttctggttccttgaagtcaat
accgcaccgggcatgaccgatcacagcctggtgccgatggcggcgcgggctgccggtctg
gatttccagcaactggttctggccattctggccgccagcgttgaagacgcaggcgtaaca
gaggcgcgaggttaa
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