Pseudomonas atacamensis: JWU58_06920
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Entry
JWU58_06920 CDS
T07336
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JWU58_06920 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pata01007
]
JWU58_06920 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pata03016
]
JWU58_06920 (aspS)
03029 Mitochondrial biogenesis [BR:
pata03029
]
JWU58_06920 (aspS)
Enzymes [BR:
pata01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JWU58_06920 (aspS)
Amino acid related enzymes [BR:
pata01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JWU58_06920 (aspS)
Transfer RNA biogenesis [BR:
pata03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JWU58_06920 (aspS)
Prokaryotic type
Other AARSs
JWU58_06920 (aspS)
Mitochondrial biogenesis [BR:
pata03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JWU58_06920 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QSL89016
LinkDB
All DBs
Position
1503865..1505640
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AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAA
ADRVRSEYVVKITGKVRLRPAGATNANMASGMIEVLGYELEVLNESETPPFPLNEFSDVG
EETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKEIMGLTEQMIRNLFKEVLNLEFGEFPHMTFEEAMRRYGSDKPDLRIPLELVDVAD
QLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
AAGVEGLQSPIVKNIPEDKLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL
KLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPQELEANPAGALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccactattgcggccaactgaacgaaagcctggaaggccaggaaattacc
ctttgcggatgggttcaccgtcgccgcgaccacggcggggtgattttcctcgacatccgt
gatcgtgatggtctggcccaggtggtgttcgacccggatcgcgccgagagcttcgccgcc
gccgatcgcgtgcgcagcgaatacgtcgtgaagatcaccggcaaggtgcgtctgcgtccg
gcgggcgcgaccaacgccaacatggcctcgggcatgatcgaagtgctcggttatgaactg
gaagtgctgaacgagtcggaaaccccgccgttcccgctcaacgagttctccgacgttggc
gaagaaacccgcctgcgctatcgcttcctcgacctgcgtcgtccggaaatggccgagaag
ctgcgtctgcgttcgcgcatgaccaccagcatccgtcgcttcctcgacgagaacggcttc
ctcgacgtcgaaacgccgatcctgacccgggccaccccggaaggcgcgcgtgactatctg
gtgccgagccgtacccacgccggttcgttcttcgccctgccgcaatcgccgcagctgttc
aagcaactgctgatggtggccggcttcgaccgttactaccagatcgccaagtgcttccgt
gacgaagacctgcgtgccgaccgtcagccggaattcacccagatcgacatcgagaccagc
ttcctcgatgaaaaagagatcatgggcctgaccgagcagatgatccgcaacctgttcaag
gaagtgctgaacctggagttcggcgaattcccgcacatgaccttcgaagaagccatgcgc
cgctacggttcggacaagccggacctgcgtattccgctggaactggtcgacgttgccgac
cagctcaaggaagtcgatttcaaggtgttcagcggcccggccaacgatccgaagtgccgc
attgccgcactgcgcgttccaggcggggcgagcatgccgcgcaaacagatcgacgactac
accaagttcgtcggcatctacggtgccaagggcctggcgtacatcaaggtcaacgagcgt
gctgccggtgttgaaggtctgcaatcgccgatcgtgaagaacatcccggaagacaagctc
aacgtgatcctcgatcgcgttggcgcagtcgatggcgacatcgtgttcttcggtgccgac
aaggccaagatcgtcagcgaagccctgggcgcgctgcgtatcaagctcggtcacgacctc
aagctgctgacctgcgagtgggcaccaatgtgggtcgtcgacttcccgatgttcgaagag
aacgacgacggcagcttctcggcgctgcaccacccgttcaccgcaccgaagtgcaccccg
caggagctcgaagccaacccggccggcgcactgtcccgtgcgtacgacatggtgttgaac
ggcaccgagctgggcggcggttcgatccgtatccaccgcaaggaaatgcagcaagcggta
ttccgcctgctgggcatcaacgaagcggaacaggaagagaagttcggcttcctgctcgac
gcgctgaagtacggtgcaccgccgcacggtggtctggccttcggcctggaccgtctggtg
atgctgatgaccggcgcccagtcgatccgtgaagtgatcgccttcccgaaaacccagagt
gctgccgacgtgatgacgcaggctccgggcgtagtggatgccaaggcactgcgcgagctg
cacattcgcctgcgcgaaacgccaaaggctgagtaa
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