Pseudomonas atacamensis: JWU58_26430
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Entry
JWU58_26430 CDS
T07336
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00250
Alanine, aspartate and glutamate metabolism
pata00310
Lysine degradation
pata00350
Tyrosine metabolism
pata00650
Butanoate metabolism
pata00760
Nicotinate and nicotinamide metabolism
pata01100
Metabolic pathways
pata01120
Microbial metabolism in diverse environments
Module
pata_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JWU58_26430 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JWU58_26430 (gabD)
00310 Lysine degradation
JWU58_26430 (gabD)
00350 Tyrosine metabolism
JWU58_26430 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JWU58_26430 (gabD)
Enzymes [BR:
pata01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JWU58_26430 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JWU58_26430 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JWU58_26430 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QSL87663
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All DBs
Position
complement(5841587..5843029)
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDA
VYDAFAEKLKVAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVSKGATVLAGGKA
MEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggtc
gatgccgacaacggtcagacgatcaaggtcaacaacccggccaccggcgaaatcctcggc
accgtgccgaagatgggcgccgccgaaacccgccgtgccattgaagctgctgacaaagcg
ctgccggcctggcgtgcgctgaccgccaaagagcgtgccggcaagctgcgtcgctggttc
gaactgatgatcgagaaccaggacgacctcgcgcgcctgatgaccctcgagcaaggcaag
ccgctggccgaagccaagggcgaaatcgtttacgccgcatcgttcatcgagtggttcgcc
gaagaagccaagcgcatctacggtgatgtgattcccggccaccagccggacaagcgcctg
atcgtgatcaagcagccgatcggcgtcaccgctgcgatcactccgtggaacttcccggca
gcaatgatcacccgcaaggccggcccagcgctggccgccggttgcaccatggtgctcaag
ccagcatcgcaaactccattttccgctttcgccctcgccgaactggctcagcgcgcgggc
attccggcgggtgtgttcagcgtggtgtccggcagcgccggtgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaactgtccttcaccggctcgaccgaaatcggtcgccag
ttgatggccgaatgcgccaaggacatcaagaaagtctcgctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgccgatctggataaggccgtcgaaggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgtctgtacattcaggacgcg
gtctacgatgcgttcgccgagaagctgaaagtggcggtggccaaactgaagatcggcaac
ggtctggaagacggcaccaccaccggcccgctgatcgacgaaaaagccgtggccaaggtt
caggaacacatcgctgatgccgtaagcaaaggcgccaccgtactggcgggcggcaaggcg
atggaaggcaacttcttcgagccgaccattctgaccaacgtgccgaaaaacgcggccgtg
gccaaggaagaaacctttggtccgctggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgccatgtccaacgacaccgaattcggtctggcttcttacttctacgctcgtgac
cttggccgtgtgttccgtgtcgccgaagcgctggagtacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgtttggcggcatcaaggcttcgggcctgggccgt
gaaggctccaagtacggcatcgaagactacctggaaatcaaatacctctgcctgggcatc
taa
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