Pectobacterium atrosepticum 21A: GZ59_00620
Help
Entry
GZ59_00620 CDS
T03293
Name
(GenBank) ECF-family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GZ59_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pato03021
]
GZ59_00620
Transcription machinery [BR:
pato03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZ59_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
Sigma70_ECF
Rv2175c_wHTH
Fe_dep_repress
HTH_29
HTH_24
HTH_10
HTH_31
GerE
HTH_Mga
HTH_IclR
HTH_7
PAX
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
AIK11979
LinkDB
All DBs
Position
73366..73878
Genome browser
AA seq
170 aa
AA seq
DB search
MVRKATASVNDFAQQLYFDHHRWLYNWLRHKLDCSQNAEDLAQDTFLSVLMNPELLTIRQ
PRPFLATVARRLVANHYRRKKIEDAYLDVLSTQPDACMPSPETRLLTLEILEQLDAALDG
LPAPVREAFLLAHLHGMRYSDIAERLRVSSSSVKQYLQRANLQCFFALPL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaagcgacggccagcgtgaatgactttgcccaacagctctatttcgatcat
caccgctggttgtataactggctgcgccataaactggattgttcccagaatgcggaagac
ttggcacaggatacgttccttagtgtgctgatgaacccggagttgctcacgattcgccag
ccgcgcccgtttctggccaccgtggcccgccgtttagtcgccaatcattatcgtcgtaaa
aaaattgaagatgcctatctggatgtgttgagcacgcagccggatgcctgtatgccttcc
ccggaaacgcgtcttcttaccctcgaaattcttgaacagcttgatgctgcactggatggc
ctgccagcgccagtcagagaggcgtttctgctggcacacctccacggtatgcgctacagc
gatatcgccgagcgtttacgcgtttccagcagttcagtgaaacagtatctgcaacgcgcc
aacctccaatgtttctttgctttgccgctatga
DBGET
integrated database retrieval system
