Pseudonocardia autotrophica: Pdca_46050
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Entry
Pdca_46050 CDS
T06156
Name
(GenBank) transcriptional regulator
KO
K09681
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_46050
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pdca_46050
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_30
HTH_8
HTH_24
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BBG03396
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Position
4891775..4892722
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AA seq
315 aa
AA seq
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MHVLDIYHADMHELLAPALHRFVAVAQDGNLTRAAERIGVPQPTLSRSIARLEDDLGIAL
FRRVGRGLRLTPAGRTLQTRAEAALAELAAATAELAGDADPATGLVTLGFLGTLGPEVVP
RILRGFRDAHPRIRIDLVQTQHAALLDRVRDGTVDLALTSPMPDEPGLVANALAEEELRL
TVPSGHRLADEPVADLAEVAGEPFLQFARGYGLHGIVRAWCEQAGFRPRVAFEGGETATL
RGLVGAGLGVALLPLGPDVPGVVQLPVRTPRTVRTLGMVHAAGGRRTVPVRDLCDFVAEH
GPRLLGPDPRATVGR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctggacatttaccatgcagatatgcatgagttgctggcaccggcgctgcac
cgcttcgtcgccgtcgcgcaggacgggaacctgacccgcgcggccgagcggatcggcgtg
ccgcagccgacgctgtcccgctcgatcgcccgcctggaggacgatctgggcatcgcgctg
ttccggcgggtcggccgcggcctgcggctgaccccggccggccgcaccctgcagaccagg
gcggaggcggcgctggccgagctcgcggcggccaccgccgagctggcaggcgacgcggac
ccggcgaccggcctggtcaccctcggcttcctcggcacgctcggccccgaggtggtgccc
cggatcctgcgcggcttccgcgacgcacacccgcggatccggatcgacctcgtccagacc
cagcacgcggcactgctcgaccgggtccgcgacggcaccgtcgacctggccctgacctcg
ccgatgcccgacgaaccgggcctggtcgcgaacgcgctcgccgaggaggaactgcggctc
acggtgccgtccggccaccggctggcggacgagccggtcgccgatctcgctgaggtggcc
ggcgagccgttcctccagttcgcccgcgggtacgggctgcacggcatcgtccgcgcctgg
tgcgagcaggccgggttccggccgcgggtggcgttcgagggcggcgagacggcgaccctg
cgcggcctggtcggcgccggtctgggggtggcgctgctgccgctcgggccggacgtcccc
ggcgtcgtccagctgccggtccgcacgccgcgcaccgtccgcacgctcgggatggtgcat
gccgccggtggccgccggaccgtgcccgtccgcgacctgtgcgacttcgtcgccgagcac
ggtccgcggctgctcggcccggatcctcgggctaccgtcggacgatga
DBGET
integrated database retrieval system
