Pseudonocardia autotrophica: Pdca_53380
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Entry
Pdca_53380 CDS
T06156
Name
(GenBank) hypothetical protein
KO
K04043
molecular chaperone DnaK
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pdca_53380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paut03019
]
Pdca_53380
03110 Chaperones and folding catalysts [BR:
paut03110
]
Pdca_53380
03029 Mitochondrial biogenesis [BR:
paut03029
]
Pdca_53380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paut04147
]
Pdca_53380
Messenger RNA biogenesis [BR:
paut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pdca_53380
Chaperones and folding catalysts [BR:
paut03110
]
Heat shock proteins
HSP70 / DNAK
Pdca_53380
Mitochondrial biogenesis [BR:
paut03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Pdca_53380
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Pdca_53380
Exosome [BR:
paut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pdca_53380
Exosomal proteins of breast cancer cells
Pdca_53380
Exosomal proteins of colorectal cancer cells
Pdca_53380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Motif
Other DBs
NCBI-ProteinID:
BBG04129
LinkDB
All DBs
Position
5636253..5638094
Genome browser
AA seq
613 aa
AA seq
DB search
MLTSKSAGYLLGVDVGTTRTAAAVIRSGSSGPEMVTLGDHSVDIPSVVHCAPDGALLFGD
AAERRALTEPDRVAREFKRRIGDPTPIPLGEHAFTAEQLSALLAAHIVDIVSRIEGGPPD
RIAVAHPASWGGHKRELFAGALAERGLAVTFLSEPQSAALHYAANERVEGGATVAVYDLG
GGTFDAAVVRKETAGTTDTGGTVIGGTLFTLLGRPEGVEQLGGADFDQAVVDHVREAVPQ
AFEALDEADPDSWSQMARLRRDCREAKEALSADTEVSIPVWLGEVRTTVRLHRSDFEERV
RPRLAESVEALQRAIESAGLAASGPSVVLLVGGSSRVPLVAQLVSSELGRPVQVDADPKN
AIAKGAVLALGPVDPATATPAASAGAGLTGSGFATAGGAALADDPGPLPWEGEDPATGRL
PAGAPPTTQLPPGQTAYLDGANADPPTDRIPVVPPAYGGYPGDEPATASYGYDDGTTVSP
PAGSARRSPAVLIGAGGVVAALAVLSAVFFWPQDRTISNATPELPALPTTSEAPPPPSEE
PPPPPPPQQNPEPTRERTTVRTTSEDAPPPPPPPPPVTTPDDPPSTEPSEDPQPTETETS
TPSTTSDVAPPPP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaccagcaaatcggcgggctacctcctgggtgtcgacgtgggcacgaccaggacg
gcggccgcggtcatccgttccgggagctccggcccggagatggtcacgctcggcgaccac
tcggtcgacattccgtccgtggtgcactgcgcgccggacggcgcactgctgttcggcgac
gccgccgagcgtcgcgcactgaccgagcccgaccgggtcgcgcgcgagttcaagcgccgc
atcggcgacccgaccccgatcccactcggcgagcacgccttcaccgccgagcagctgtcc
gcgctgctggccgcgcacatcgtcgacatcgtgtcccggatcgagggcggtccgccggac
cggatcgcggtcgcccacccggcgtcctggggcgggcacaagcgggagctgttcgccggg
gcgctcgccgagcgcggtctggccgtcaccttcctcagcgaaccgcagtcggccgccctg
cactacgccgccaacgagcgcgtggagggcggcgcaaccgtcgccgtctacgacttgggc
ggcgggacgttcgacgccgccgtcgtccgcaaggagacggccgggaccaccgacaccggc
ggcaccgtgatcggcggaacgctgttcaccctgctcggccggccggagggtgtcgagcag
ctgggcggggcggacttcgaccaggccgtcgtcgaccacgtccgggaggccgtgccgcag
gcgttcgaggcgctcgacgaggccgatccggacagctggtcgcagatggcccggctgcgg
cgcgactgccgtgaggccaaggaggcgctgtccgccgacaccgaggtctcgatcccggtc
tggctgggcgaggtccggacgaccgtgcggctgcaccgcagcgacttcgaggagcgcgtc
cggccgcggctcgccgagtcggtggaggcgctgcagcgggcgatcgagtccgccgggctc
gccgcatccggcccgtcggtcgtgctgctggtgggtggctcgtcccgggtgccgctggtg
gcgcagctggtgtcgtccgagctcggacggccggtgcaggtggatgccgacccgaagaac
gcgatcgcgaagggcgccgtgctggcgctcggtccggtcgacccggccaccgcgaccccg
gcggcctccgccggagcggggctcaccggcagcgggttcgccaccgccggcggtgccgcg
ctggccgacgatcccggcccgctgccgtgggagggcgaggacccggccaccggccggctc
ccggccggtgcaccgccgaccacccagctgcctcccggccagaccgcctacctggacgga
gcgaacgccgatccgccgaccgaccggatcccggtcgtgccgccggcctacggcgggtac
ccgggcgacgagccggccaccgcgagctacggctacgacgacggcaccaccgtctccccg
ccggccggttcggcgcggcgctcgcccgcggtgctcatcggggccggcggggtggtggcg
gcgctcgcggtgctgagcgcggtgttcttctggccacaggaccgtacgatcagcaacgcg
acgccggagctgcccgcgttgccgacgaccagtgaggcaccgccgccgcccagcgaggag
cccccgccgcccccgccgccgcagcagaacccggagccgacccgggagcggacgaccgtg
cgcacgacgtcggaggacgcgccgcctcccccgccgccgcccccgccggtgacgacgccg
gacgatccgccgagcacggaaccgagcgaggacccacaacccaccgagacggagacgtcg
acgccttcgacgacaagcgacgtggccccgccgcccccgtag
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