Prunus avium (sweet cherry): 110747792
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Entry
110747792 CDS
T05161
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
pavi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110747792
03015 mRNA surveillance pathway
110747792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110747792
03036 Chromosome and associated proteins [BR:
pavi03036
]
110747792
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110747792
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
110747792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
110747792
NCBI-ProteinID:
XP_021803585
UniProt:
A0A6P5RF85
LinkDB
All DBs
Position
Unknown
AA seq
169 aa
AA seq
DB search
MERRNRDDKMGGPGPQNQAQTRGPPGRPLPPPPPHSRGPPPPPPPRLEPVDREKTCPLLL
RVFTKIGSHHNNEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIAPEARRRNAKLSFA
FVYPDRRGHFVVKTVGMTHSYGNGRNPDENKALNDFNFQIGDYLDVAVL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagaaacagagacgacaagatgggcggaccgggtccccagaaccaagcccag
acccgaggtccacccggcagacccctccctcctcctcctcctcactctaggggtccaccg
cccccgccccctccccgcctcgagcccgtcgaccgtgaaaagacttgccctttgttgctt
cgggttttcactaagattggaagtcatcataataatgaggattttgcagtcagaggcaag
gaacccaaagatgaggtccaaatttatacatggaaagacgcgacacttcgcgagctaact
gatcttgtcaaagagattgctccagaggctaggagaagaaatgcaaaactttcttttgct
tttgtataccctgacaggcgcggtcattttgtggtgaaaacggttgggatgacacattct
tatggaaatggtagaaatccggatgagaacaaggcattgaatgattttaacttccagatt
ggggattatttagatgtggcggtcctatag
DBGET
integrated database retrieval system
