Prunus avium (sweet cherry): 110749603
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Entry
110749603 CDS
T05161
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110749603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pavi04131
]
110749603
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110749603
Membrane trafficking [BR:
pavi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110749603
Atg1 complex
110749603
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110749603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
110749603
NCBI-ProteinID:
XP_021805429
UniProt:
A0A6P5RWG5
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MDFQNNFQLESGKLEQIVSRFLLKSLHIVLDSRIPSLHPHDRSGDLSSVPQVRKRDKWFN
LILGDRPAALENLNFWHRNVMDPMIIDIILVRGGPSSSSVDNLYVNSVEGTSVETIIERW
VVQYETPRVVAPQTGDTSASYKKTYKKSIILLRTLYSYMRLLPAYRIFRQLSTSSQTYNF
DIIYKVSSLRDPFSRAEEELMEEYSFAPVEAHPGRLSLSVTYRSTLSDFNLEPAAPMPPR
IITDYVGSPATDPLRSFPSSEKGVSATSFPRGGIPPPYTVPLQRPHTWTSGFYRPPPFNH
NKPLVGSPPAYRAPPMSHDVGSPPIDTFANRVQNYRPLGGHQRNTSYDEYQLSPPFSPSP
SPSPPTYLSSGNLNPMQTRIRSGTAPVSIPLPMGSRSPRYLSPNFSDPSRNSLPPLSPRS
IRNDASSQESPSVIRAFRKLEASRAGEMHPGTSNHMVGQKVMKDSKDDSGRFSGLLSSSG
SPRVGFSRSSSRLSFQDDLDGFEFSCPFDVDDVDTSDSQVSQNLDGRKASEYTSQSLPIG
RKSHDAAVGVLVQMLRTAPPLRQDSSCYSSQSVKPEHEGGVATASGFFMPRKTSDALEEL
RSYKEMKDLLLSKSGMRVLAKEEA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataattttcagctcgaatcagggaaattggaacagatagtttcccgg
tttctgctgaagagcttgcatattgttttggactctaggatcccttctcttcacccacat
gatcgcagtggtgacctgtcatccgttcctcaagtgagaaagagagacaagtggttcaac
ttaatactaggggaccgccctgcagctcttgaaaatttgaatttttggcacagaaatgta
atggatccaatgataattgacataatacttgttcgtggagggcctagttcttcttctgtt
gacaatctatatgtgaattctgtggaggggacatctgttgagacgattatagagaggtgg
gttgtccagtatgaaactccgcgggttgtggctccccaaactggtgacacttcggcctct
tataagaagacatacaagaagtcaatcatacttttacgtactctttattcatatatgagg
cttcttccagcttataggatctttagacagctaagtacatctagtcagacttataatttt
gatattatttacaaggtgtcttcacttagagatccattctcaagggcggaggaggaacta
atggaggagtacagttttgctcctgtagaggctcatcctggccgcctttctttatccgtg
acttaccgttcaacactatctgatttcaatcttgagcctgcagcaccaatgccacctagg
ataattacagattatgttggtagtcctgccactgaccccctgaggtctttcccctcatca
gagaagggtgttagtgcaacttcctttccgcgaggaggaataccaccgccatatactgtg
ccacttcaacgcccacacacctggacaagtggcttctacaggccacctccttttaatcac
aataaacccctagtcggatctccacctgcatatcgtgcacctccaatgtcacatgacgtt
ggatctcctcctattgatacatttgctaacagagttcaaaactatagacctctaggtggt
catcagagaaatacgagttatgatgagtatcagctttcacctccattttcgccatctcca
tccccatctcccccaacatacttgtccagtggaaatttaaatcctatgcaaactcgaatt
cgttcaggaactgcccctgttagtatccctcttccaatggggagcagaagccctagatac
ttgtcccccaatttttctgatccaagtagaaattctcttcctccattatcacccagaagc
ataaggaatgacgcttcctctcaagagtctccatcagtaatcagagcatttagaaaatta
gaggcttcaagggccggtgagatgcaccctggaacatcaaatcatatggttggtcagaag
gtgatgaaagacagtaaagatgattcagggcggttctcaggattgttgtcttctagtggc
tcaccacgtgttggattttctagaagctccagtagattatctttccaggatgatttggac
ggttttgagttctcatgtcctttcgacgtggacgatgttgatacatcagattctcaagtc
agtcaaaatctcgatggcagaaaagcttctgagtatacatcacagtcattgccaataggc
agaaaatcacatgatgctgcggttggcgttctggttcagatgctgaggacagctccacct
ctgcgccaagattcaagttgttactcatcccagtctgtgaaacctgaacacgagggagga
gttgctacagcttctggtttctttatgcctcggaagacatctgatgcgctggaggagctc
agaagttataaagaaatgaaagaccttctactatcaaagagtggaatgagggtgcttgct
aaagaagaagcataa
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