Prunus avium (sweet cherry): 110750028
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Entry
110750028 CDS
T05161
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110750028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110750028
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110750028
mRNA degradation factors
5'-3' decay
Decapping complex
110750028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
110750028
NCBI-ProteinID:
XP_021805971
UniProt:
A0A6P5RXW5
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MAQNGKLRPNLDQQSTKLLNLTVLQRIDPFIDEILITATHVTFYEFNTDLSEWSRKDVEG
SLFVVKRNAQPRFQFIVMNRRSTENLVEDLLGDFEFEVQVPYLLYRNAAREVNGIWFYNA
SECEDVANLFSRILGAYSKVSSTKSEFEELEAVPTIAFMDGPLEPSSSTACIVTDVPDDP
AFVNFFSTATTIVNSSTTTITGQPYQSSSSSTISLPSHPVGVAPSPIPSMQISSATVSPF
LDILESHSNTKLVNNLVKPSSFFVPPSSSPTTMPRVSSSVPTAPLLHPAVSLQRPYGAPL
LQPFPPPAPPPSLTPASFPIPNYGPVNRDKVRNALMLLVQDNHFIDMVYGALLNAHHS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacgggaaattaaggccaaatctggaccagcagagcacaaagcttctcaat
cttactgttctccagcgaatcgacccatttatcgacgaaattctcatcaccgcaactcat
gtcaccttctacgagttcaacactgacctcagcgaatggagtcgcaaggacgtcgaagga
tctctgttcgtcgtcaagaggaatgctcaacctcggtttcagtttattgtgatgaatcgc
cggagtactgaaaatttggtggaggatcttttgggagattttgaattcgaagttcaggtt
ccatatcttttgtatcgaaatgcagcccgagaggtcaatggtatttggttctacaatgca
agtgaatgtgaagacgtggcaaatctttttagcaggatacttggtgcatattccaaggtg
tcatcaacaaagagcgagtttgaggaactggaagcagtcccaactatagcttttatggat
ggtcctttggagccatcatcatcaactgcctgcattgtcacagatgttccagatgatcct
gcctttgtgaacttctttagtacggctacaactatcgtgaattcttcaactacaacaatt
actggacagccttaccagtcttcttcttcttcgacaatctctctaccttcccatccagtc
ggagttgccccttcccctattcctagcatgcagatatcatctgcaactgtatcccctttc
cttgacatccttgaatcccacagcaacaccaaactggtcaataatcttgtaaagccatct
tcgttttttgtccctccttcctcttcaccaacaacgatgccacgtgtctcttcatcagtg
cctactgctcctcttcttcaccctgctgtaagtctacaacgtccatatggtgctcctttg
ttacaaccttttccaccaccagctcctccaccatctctcactcctgcttcttttcctatc
cccaactatgggccagttaacagagacaaagttcgaaatgcactcatgctgcttgtgcag
gacaatcatttcatcgacatggtatatggagcactcctgaatgcacaccattcataa
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