Prunus avium (sweet cherry): 110750583
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Entry
110750583 CDS
T05161
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110750583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110750583
Enzymes [BR:
pavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110750583
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110750583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
HHH_8
Motif
Other DBs
NCBI-GeneID:
110750583
NCBI-ProteinID:
XP_021806622
UniProt:
A0A6P5RVL1
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MLSLNLRPLSIMSKRQRPIQSPPSTPPTPQTRNPKRPKTILKPTKWVPLNLTQSELSLPL
TFPTGQTFRWRQTGPLQYTGVVGSHLVSLRHLENGDVSYCLHHTTTSETNAKLALLDLLN
VGISLAGIWEVFSASDSRFAELASYLGGARVLRQDPVECLIQFLCSSNNNIQRITKMVDF
VSSLGNHLGSVGGFEFHEFPSLERLSMVSEKEFREAGFGYRAKYITGTVKALQLKPGGGA
EWLLSLRKTELEEGIEALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPE
LAGARLTPKLCGRVAEAFVSKYGKYAGWAQTLLFIAELPSQKALLPAHFSNAKESKAAKK
KDRKSHTAVDTSIVY
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctctcactgaacctgagacccctctcaatcatgagcaagagacaaagacccattcaa
tctcctccatcaacccctccaaccccacaaacccgcaaccccaaaagacccaaaaccatc
ctcaaacccaccaaatgggtcccactcaatctcacccaatccgagctctccttgcccctc
accttccccaccggccaaaccttcaggtggagacagaccggccctcttcagtacacaggc
gttgttgggtcccacttagtatccctcaggcacctcgaaaacggcgacgtttcctactgc
cttcaccacaccaccacctccgaaaccaatgccaagttggccttgctcgaccttcttaat
gtgggtatttctctggctggcatttgggaggttttctcggcctcggattcaaggtttgct
gagctcgcgagctatttgggcggtgcgcgagtgcttaggcaagacccagttgagtgtttg
attcagtttctttgttcatcaaataacaacatccagagaattaccaaaatggtagatttt
gtatcttcgttggggaaccatttgggttctgttggaggttttgagttccatgaatttcca
tctttagagcgcttgtcaatggtctcagagaaagagttcagagaggctggttttggctat
agggccaagtacataactggcactgtaaaagctttgcaattgaaacctggtggaggagca
gagtggcttttgtctctgcgtaaaacggagctcgaagaggggattgaagctctttccaca
ttgcctggagttggtcctaaggtggcagcatgtatagctcttttctcgcttgatcaacac
catgccattcctgttgatacacacgtgtggcagattgctactagatacctcatacccgag
ctagcaggtgctcgtctgacacctaagctctgcggccgtgtggcggaggcatttgtgagt
aaatatgggaaatatgctggctgggctcaaactctgctttttattgctgaattaccttcc
caaaaagcccttctaccagcacatttttcgaatgcaaaagagagtaaagctgcaaagaag
aaggatcgtaaatcgcacactgcagtggatacttcaatagtttattaa
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