Prunus avium (sweet cherry): 110754810
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Entry
110754810 CDS
T05161
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110754810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110754810
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110754810
mRNA degradation factors
5'-3' decay
Decapping complex
110754810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
DUF4449
Motif
Other DBs
NCBI-GeneID:
110754810
NCBI-ProteinID:
XP_021811610
UniProt:
A0A6P5S3P2
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MASSGNPNPPPQQQPQPFDMQKFFKPTNPTPLSPQSQTQNNSNQNPNPNLSSSSFPIPPA
SFPPPSGPYSYPPQTAPFHHHQFQYHPHPQPHPHGNHPQIPYSPQDHHLLHQRSLSFPTP
PLQPPSTYNIATAPSNPSSNNSSTSNSNPNSGARIMALLGAPSGNLELSAAQPELSVPPG
VSIVPTIPMGIPPTGPTRMPSNKLPKGRHLIGDNVVYDVDVRLQGEFQPQLEVTPITKYG
SDPQLVLGRQIAVNKSYICYGLKQGNIRVLNIHTALRSLFRAHTQRVTDMAFFAEDVHLL
ASVSVEGRLFVWKISEGPDEEGTPQITGKVVIAIQIVGEGEAVHPRVCWHCHKQEVLVVG
FGKRVLRIDTTKVVKGEVPSADEPLKCPVEKLIDGVQFVGKHDGEVTDLSMCQWMTTRLV
SASIDGTIKIWEDRKAQPLLVLRPYDGHPVYSATFVTAPHRPDHIILITVGPLNREVKIW
SSASEEGWLLPSDAESWKCTQTLELKSSAEPRVEGAFFNQVIALSQAGLLLLANAKKNAI
YAVHLEFGPDPAATRMDYIAEFTVTMPILSFTGTSISPHGEQIVQVYCVQTLAIQQYALE
LSKCLPPPLDNVGLEKSDSNISREPSGAEGFALDLSGSKPTEMLLANSNSALKQTIQDSS
SEGAVSVRYPVSSSSVEATTSKDITTSSTESRPVALASANSDSDVVFVASPPIPLSPRLS
GKVSGLRSPTDGSDPGRTLNEHGGDQQVNDYSVDRQLDSVRSNLSDVPAVDDDSRNIEQK
VGQDDLSSVLNPPIMFKHPTHLITPSEILMAASSSEGTNPIDSKNEGEANIQDVIVNSDM
GNAEVEVKVVGEARSTQNDEFGSQGEPQNVVSENKEKFFCSQASDLGIEMARECCAISAE
TYTTDEARQVDDSSMTEPLTQSNAGDEDQESAKDVSGPCTTPTVFQSHTPTTKVKKQKWK
NSQASGQSSPSPSMLNSIDSNNEPGGSSSPPSAEAAFPQIMAMQDTINQLLTMQKELQKQ
MTMMVAVPVTKEGRRLEAALGRSMEKAVKANNDALWARFQEENAKNEKLLRDRNQQITSL
INNFMNKDFPVMLEKMVKKELAVVGPAVARAITPAIEKAIPPAISDSFQRGVGDKAVNQL
EKSVNSKLEATVSRQIQAQFQTSGKQALQDALKSSMEASVVPAFEKSCKAMFEQVDATFQ
KGMLEHTNAAQQHFDSAHSPLALALREAISSASSVTQTLSGEVADGQRKLIALAAARTSS
SAVNPLVTQLTNGPLGSLHEKVEVPLDPTKELSRLVSERKYEEAFTGALQRSDVTIVSWL
CSQVDLHGVLLLNPLPLSQGVLLSLLQQLACDISNDTSRKVAWMTDVAAAINPVNQMIAV
HVRPVFEQVYQILHHQHSLPTISSAEHTSIRLLMHVINSMLMACK
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctgggaatccaaatccaccgccccagcagcaaccccaaccctttgacatg
cagaaattctttaaaccaacaaacccaacgccactctcgccccaatcccaaacccagaac
aattcaaaccaaaaccctaaccctaatttgagttcctcttcgttcccaatcccacccgcc
tctttccccccgccctctggcccttactcgtaccctccccagacggcaccgtttcaccac
caccaattccaataccaccctcaccctcagccccacccccacggtaaccatccccaaatc
ccttactctcctcaagaccaccacttgctccaccagaggtctctctcatttcccacgcca
cccctccaacccccctctacttacaacattgccacggccccttccaaccctagcagcaac
aacagtagcacctccaattcgaaccccaattctggtgctcgaatcatggcgcttctcggc
gctccatctggcaatctagagttgtcggctgctcagcccgagttatccgtccccccaggg
gtctcgatcgtgcccactatccctatggggattccacccactggccccactcgaatgccg
agcaataagctccctaaaggcaggcatttgattggcgataatgtggtttacgatgtggat
gttaggttacagggtgagtttcagccacagcttgaagttacgccgattaccaagtatggt
tcggatccccagcttgtgctgggccgccaaattgctgttaataagtcgtacatatgctat
ggattgaagcagggaaacattcgggttttgaatatacacactgcattgagatctttgttt
cgagctcatacacagagggtcacagacatggctttctttgctgaggatgttcaccttttg
gctagtgtgagtgtagaaggacggctttttgtatggaagatttctgaaggtccagatgaa
gaaggtacaccacaaatcacaggaaaggttgttattgccattcaaatagttggagagggg
gaagctgttcatccacgagtttgttggcactgtcataaacaagaggttttggtagttggg
tttggaaagcgtgtattaagaattgatactactaaagtcgtgaagggtgaagtcccttct
gcagatgagcctctcaagtgtcctgttgaaaagctgattgatggagtccaatttgttggt
aaacatgatggagaagtgactgatttgtcaatgtgccaatggatgaccactcgtctggtt
tctgcttctatagatggaacaataaagatctgggaagatcgcaaggcacaaccactttta
gtattgagaccctatgacggccatccggtttattcagctacatttgtgacagctccccac
cggccagatcatattatacttatcacagtggggccacttaatcgggaagtgaagatctgg
tcctcggcgagtgaagaaggctggctacttcccagtgatgctgagtcatggaaatgtacc
cagacattagagctgaagagttctgctgaaccccgagtagagggggcattctttaatcaa
gtcattgctttgtcacaggctggccttctcttacttgcaaatgctaagaagaatgctatt
tatgctgtgcacttagaatttggtcctgatccagcagcaactcgcatggattatattgca
gaatttactgttaccatgcctattttgagctttactgggacaagtatttcacctcatggt
gaacagattgtccaggtttattgtgtccagacactagccattcagcagtatgctctggaa
ttatccaagtgcttgcctccaccactggataatgtgggtttagaaaagtcagattccaat
atttcacgtgaaccatcaggggctgaaggatttgctttggatctatctggaagtaaaccc
acagagatgctgctagctaattcaaattcagcacttaaacaaaccatacaagatagtagt
tctgagggtgcagtttccgtgaggtatcctgtaagctctagttctgttgaggcaaccact
tcgaaagatattaccacatcaagtacagaatcaagacctgttgcattggcatcagctaat
agtgattcagatgttgtttttgttgcatcaccacctattcccttgagtcctaggttgtct
gggaaagtttctggtttaagaagtccaacagatggctctgacccgggtcgcacactcaat
gagcatggtggagaccaacaagtcaatgattactcagttgacaggcaattggacagtgtt
cgttcaaacttgtcagatgtgcctgcagtggatgatgattcaagaaatattgagcagaaa
gttggacaagatgatttatctagtgtgctcaatcctccgatcatgtttaaacatccaacc
catcttataactccctctgagattttaatggctgcttcatcttctgaaggtactaatcct
attgacagcaagaatgaaggggaggcaaacatccaagatgtgattgttaacagtgatatg
ggtaatgctgaggtggaggttaaagtagtgggtgaagcaagatctactcaaaatgatgaa
tttggatctcaaggagaacctcaaaatgttgtttcagaaaataaggaaaaattcttttgc
tcccaggcatcagatcttggaattgagatggcccgagaatgctgtgcaatctcagccgaa
acatatactacagatgaagctcggcaagttgatgattccagcatgacagaaccactgacc
cagtctaatgctggagacgaagaccaggaatctgcaaaagatgtatctgggccatgtacc
accccaacagtttttcaatcgcatacaccaactacaaaagtgaaaaaacagaagtggaaa
aactctcaagcatcaggtcaatcttccccatcaccaagtatgctcaattcaatagattcc
aacaatgaaccaggagggagttcaagccccccctctgcagaagctgcatttcctcaaatt
atggccatgcaggatacgattaatcagctactgactatgcagaaagaactgcaaaagcag
atgacaatgatggttgcagtcccagttacaaaggaggggagaagattagaggcggctctt
gggcggagtatggagaaggctgtaaaggccaataatgatgctttatgggctcgttttcaa
gaagagaatgcaaagaatgagaagttattgcgagaccgtaatcagcaaataactagtttg
atcaataacttcatgaacaaggactttccagtcatgttagagaaaatggtgaagaaggaa
ttggcggtcgttggaccagctgttgctcgtgctataactccagctattgagaaagcaata
cctccagctatttctgattccttccagagaggagttggtgataaggcagttaatcaattg
gaaaaatcggttaactccaaacttgaagcaactgtttccaggcaaatccaggcgcagttc
caaacttctggcaaacaagctcttcaggacgctcttaagtctagtatggaagcttcagtg
gtacctgcatttgagaagtcatgtaaggccatgtttgagcaagtagatgctacgttccag
aaaggaatgctagaacatacaaatgcggcacaacaacactttgattctgcacattcgcca
ctggcacttgctttaagggaagctattagttctgcgtcatcggtgactcaaaccttaagt
ggagaagtggctgatggtcaacgtaagctaatagctcttgcagctgcacgaacaagctca
agtgcagtaaatcccctggtcacacaactaaccaatggacctttgggtagtctccatgag
aaggttgaggtgcctttggatccaacaaaggagctgtctaggttggtttctgaacggaag
tatgaggaggctttcactggagctctacaaagaagtgatgtgaccatcgtatcgtggttg
tgctctcaggttgatctgcatggggtattgttgctgaatcctcttcctcttagccaaggg
gtgcttctctctcttttgcaacagctggcctgtgatatcagcaatgatacatcgagaaaa
gttgcatggatgacagatgtggcggctgccataaacccagtaaaccaaatgattgcagtg
catgtgcggcctgtcttcgagcaagtttatcagatactgcaccatcaacatagcttgcca
acaatctctagtgccgagcacacaagtattagacttctgatgcatgtcatcaactccatg
ctgatggcctgtaaatga
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integrated database retrieval system
