KEGG   Prunus avium (sweet cherry): 110758373
Entry
110758373         CDS       T05161                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110758373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pavi03041]
    110758373
Spliceosome [BR:pavi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110758373
 Complex B
    110758373
 Complex C
   U2 SnRNP specific factors
    110758373
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Endotoxin_M
Other DBs
NCBI-GeneID: 110758373
NCBI-ProteinID: XP_021815913
UniProt: A0A6P5SIS0
LinkDB
Position
Unknown
AA seq 804 aa
MIGSILPLPAPPSDGDLGPLPESQVTEPINDEKQLNEEQTKANSVATHTRAIGIIYPPQD
IRNIVDKTSQFVAKNGPEFEKRIIANNTGNAKFSFLISSDPYHAYYQHRLSEFRAQNQSS
GQQPSSQPEDSATPESAPPAPATDGETGAPKLDPSAQFKSVRKVPEPPEKPEAEQYTVRL
PEGITGEELDIIKLTAQFVARNGKSFLLGLTNRETNNPQFHFLKPNHSMFTLFTSLADAY
SKVLMPPTGLTEKLKKSIADMTTVLERCVHRLEWERSQEQARQKEEDEIELERMQMAMID
WHDFVVVESIDFADDEDEDLPPPMTLEEVIRRSKVTDMEEDIVEPGKEVEMEMDVEEMQL
VEEGLRTARIEENGDEKKNENKVTDDPEPPMRIVKNWKRPEDRIPAERDPTKYVISPITG
ELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGT
TEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQNINGEDQNDVLNNDARN
LPGPAAPPPRPGVPSVRPLPPPPGLALNLPRVPPNTAQYSAPSSGGLPVPPLRPSVVQYQ
SVRPPGPPMPMSSGQQSLLVNRPPPMPPSMSMNPSVPPPPGSQFTPMQVPRPYMPLPVPP
PTMQMMPPPPLPQGMPPPPPPEEAPPPLPEEPEPKRQKLDDSMLISEDQFLAQHPGPVRI
TVSVPNVDEGNLKGQLLEITVQSLSETVGSLKEKISGEIQLPANKQKLSGKPGFLKDNMS
LAYYNVGAGEALSLSLRERGGRKR
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgataggttccattttgcccttaccggctcctccttctgatggagaccttgggcctctt
ccagaatcccaagtgactgaacctattaacgatgagaaacaattgaatgaggagcagacc
aaagccaactccgttgcaacacatactagggctattggtatcatttatcctcctcaagac
atcagaaatattgttgacaaaacttcccaattcgtggcaaagaacggaccggagtttgag
aaaaggatcatagctaataataccggaaatgcaaagttcagctttttgatttcctcagat
ccctaccatgcatattatcagcatcgattgtctgaattccgtgcccagaatcagtcttct
ggacagcaaccttcttcgcagcctgaagattctgcaacacctgagtcagccccaccagct
ccagctacagatggtgaaacaggagcaccaaagctggatccctctgctcagtttaaatcg
gtgcgcaaagttcctgaaccaccagaaaaaccagaagctgagcagtatactgttcggctt
cctgaagggattactggggaagagttggatattataaagctcacagcccagtttgtagct
cgaaatgggaaatcatttttgttaggattgacaaacagggaaacgaataacccccagttc
cattttttaaaacctaaccatagtatgtttacacttttcacttctctggctgatgcttac
tcaaaggtgttgatgcctccaacggggttgacagagaagcttaagaaaagtattgcagac
atgacaactgtgcttgaacggtgtgtgcaccggctggagtgggagcgttcacaagagcag
gcaaggcagaaggaagaagatgagattgagctggaaaggatgcaaatggctatgattgat
tggcatgattttgttgtggttgaatcaatagactttgcagatgatgaggatgaggattta
cctcctccaatgacccttgaggaggttataaggagaagcaaggtcacagatatggaagaa
gatattgttgagcctggtaaggaggtggaaatggaaatggatgtagaagagatgcagctt
gttgaagagggcttgaggacagccagaattgaagagaatggtgatgaaaagaagaatgag
aataaggtgacagatgatccagaaccaccaatgagaattgtgaagaactggaagagacct
gaagacaggatccctgctgaaagagacccaacaaagtatgtcatttcaccaatcactgga
gagcttatccctatcaatgagatgtctgaacacatgaggatttctctcattgatccaaaa
tacaaagagcaaaaagaaaggatgtttgccaagattcgggagactactctcgctcaggat
gacgaaatctcaagaaacattgtgggccttgcacgaacccgtcctgatatttttggtacc
acagaggaagaagtttctaacgctgtcaaggctgagattgaaaaaaagaaagatgagcaa
ccaaagcaggtcatatgggatggtcacactggaagcattggccgcacagcaaatcaagcc
atgtcacagaatatcaacggagaggatcagaatgatgttcttaacaatgatgcaaggaac
cttcctggtcctgcagctcctcctccaagacctggtgtgccgtctgttcgccctctaccc
ccaccaccaggtcttgccttgaatctacctcgtgttcctccaaatacagcccagtattct
gctccatctagcggtggcctccctgtacctccactgaggccatcagttgtccaatatcaa
tcagttcgacctcctggacctccaatgcccatgagttcgggacagcaatcccttttggtg
aatcggccacctccgatgccaccatcaatgtctatgaatccatctgtaccacctccacct
ggttcgcagtttacacccatgcaagttccccgaccttatatgcctcttcctgttcctcca
cctacaatgcaaatgatgccaccaccacctttgcctcaggggatgcccccgccaccacca
cctgaggaagctcctccaccgcttccagaagaacctgagccaaagcggcagaagcttgat
gattctatgcttatttcagaagatcagtttctggcacagcatccgggacctgttcgcatc
acagtatctgtccccaatgttgatgaaggtaatctgaagggacaacttttggagattacg
gtgcagtccttatctgaaactgttgggagtctgaaagaaaaaatttctggggagatccag
cttcctgcaaacaaacagaaattgagtggaaaacctggttttctcaaggacaatatgtcg
cttgcatattataatgttggagcaggagaagcacttagtctttcattaagagagcgtggt
ggaagaaagagatga

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