Prunus avium (sweet cherry): 110758379
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Entry
110758379 CDS
T05161
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110758379
03036 Chromosome and associated proteins [BR:
pavi03036
]
110758379
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110758379
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110758379
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110758379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
110758379
NCBI-ProteinID:
XP_021815927
UniProt:
A0A6P5SNW4
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSIFLEVLKCLLCCEDEHENYHGSYNQIPRQTSFHNNDYEYQTPHRNYSPPPTSTNQSPA
FYNYKPPSPPSQAPKSPFSSSSSSPKPPTSSSKPRQSSSPSPNFPTSLSKTQPSSSFNTY
STFPEPPSSSSKLPQSTFVNASSSKPLQSSVNASSFTLEFLAFASKLQVSSSVDQPSALL
KPPTSSSKLPQSTLISPSSPSLQLQIPSSRSSPPKLSTSSSKPPQASSKSHSSSPKPPTS
SKPSPSSGPPVSSSKLPPIFKQVLSPACPSVINQKVKTNYVWVEKDPLPIFAIPEDIKDL
IKNDIVPNVLNQPLSPTTYKDYFAALLYAEEFYHEKWADFNMKNVTLKLHEAAVYKNLEK
EEKTFIEFEIDSVPENRPFLLSRDLVYVRPLGTNVDQFQGIIYRIIRSHLVLVEFEDEFY
AHHDSAQKYDVSFSFNRVCLKRAHQAVQTASDALFKNFLFPDCVSRRSIPTAPALLSTHP
DKLSAVHRILSIRGSPPYLVAGSTTREVVSEAVRQLCQTSPENKVLICAPSNRCCDGIMR
SLLKVIPESDMFRANAAFREKDEVPDDILPSCLYKETYFSCPPTEELQEFRVIFSTYMSS
FRLHDKGLTAGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVTGQPGDRSRWVRADM
ARERGLKISYFERLFKSRPYRSLNPMLITHLDQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttcttgaagtcttgaaatgccttctttgttgtgaagatgagcatgagaat
tatcatggttcttacaatcaaattcccagacaaaccagtttccataataatgattatgaa
tatcaaactccccatagaaattactcgccacccccgacttctactaatcaatctccagcc
ttctataactataaacccccatcacctccatctcaagcacctaaatctccttttagttct
tcttcatcatcccctaagcctccaacatcgtcatcaaaaccgcggcaatcatcttctcca
tctcctaatttcccaacatctttatctaaaacacaaccatcttcttctttcaatacatat
tcaacattccctgagcccccatcatcttcatctaagctgcctcaatcaacttttgttaat
gcatcttcatctaaaccactacaatcctctgtcaatgcatcttcatttactcttgaattc
ctagcatttgcatctaaattacaagtatcttcttctgttgatcagccttcagcattactt
aaacccccaacatcttcatctaagctgccccaatccactcttattagtccatcttcacca
tcccttcaactccaaataccttcatctagatcatctcctcctaaactctctacatcctcc
tctaaaccacctcaggcttcatcaaaatcacattcctcatcaccaaaacctccaacatct
tcaaaaccatctccatcctcaggaccgcccgtgtcttcctctaagctccctccaatcttc
aagcaagttctatcccccgcctgcccgagtgtaataaatcaaaaggtgaagacaaattat
gtgtgggtcgaaaaggatccattacctatatttgcgattccagaggatataaaagatttg
atcaagaatgacattgtgcctaatgttctaaaccagcccctgtctcccacaacatataag
gattactttgccgctctgttatatgctgaagagttctatcatgagaaatgggcagatttc
aatatgaagaatgtgacactgaagttgcatgaagcagcagtttataaaaatctggagaag
gaagagaaaaccttcatagaatttgagattgattctgttcctgaaaataggccattcctt
ttgtcaagggacttagtctatgtacgaccattgggtacgaatgttgaccagtttcagggc
attatataccgcattattaggagccatcttgtattagtggaatttgaagatgaattttat
gctcatcatgattcagcccaaaaatatgatgtgagcttctcattcaatagagtctgtttg
aaaagagctcaccaagcagttcaaactgcatcagatgctttatttaagaacttcctcttt
cccgattgtgtttctcgtaggagcatccccactgcaccagcgctgctttctacccatccg
gataagttatctgcagttcatcgtattttaagcattcggggctcaccaccttacctagta
gctggttcgacaactcgagaggttgttagtgaagcagtacgccagttatgtcaaacatca
ccagaaaataaggttcttatatgtgctcctagtaaccgctgttgtgatgggattatgaga
agcttgttgaaagtgattccagagtcagatatgtttcgagccaatgctgcatttcgcgag
aaagatgaggtgcctgatgacatcctcccatcatgcctttacaaagagacttatttctct
tgtcctccaacagaggaactccaagaattcagggtgattttctcgacttacatgagtagc
tttcggctgcatgataaaggcctaactgctggacattttagtcatatttttctggtggat
gcttcatctgccattgagccggaaacagcagtggccttaactaattttgcagaaaaaagt
actactgttatagtcactggtcaaccaggagatcgttcacgttgggttcgcgcagacatg
gcaagggaaagggggctgaagatttcatacttcgagagacttttcaagtcaaggccatat
agaagcctcaatccaatgcttatcacacatttggaccagtag
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