Prunus avium (sweet cherry): 110758470
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Entry
110758470 CDS
T05161
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110758470
03036 Chromosome and associated proteins [BR:
pavi03036
]
110758470
Enzymes [BR:
pavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110758470
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110758470
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
110758470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
110758470
NCBI-ProteinID:
XP_021816034
UniProt:
A0A6P5SGH4
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSIFLEVLKRLFGIEDEHENQIPRQTYDYKISNRKCSPPLTSTNQSPACYNYKPPSPPSQ
PVKSPFSSSSSAPKPRTSSSKPLQSSYISTSSPSPKFPTSSSFDPFSTFSKPPTSSSKLP
QSNFVNPSSSNASPFILEFPTSVSKLQQSASVDQRSALPKPPTSSSKLSQSTLVSPSSPS
LRLQTPSSRPSPPKLSTSSSKPPQASSKSHSSSPNPPTSSKPSPSSGPPVSSTTLPPIFK
QVLSPASSDVINEKGKKSYVSVEKGSLPIFAIPEDFKDLIKNEIVPKVLKQPLSPTTYKE
YFAALLYSEEFYHEKWAHFNMKNVTLKLQKAAVYKNLDKEEKTFVEFEIDSVPENRPFLL
SRDLVYVRPSGTNAEQFQGIINRIIRSNLVLVEFEDEFYDYHYSTQKYDVSFSFNRVCLK
RAHQAVQTASDTLFKNFLFPDCVSRTSIPTAPALPSGSHKLDPKQLSAVCHILSIQGSPP
YLVTGQLCFERNVFRPSRTGAVVCAAVHQLCQTSLKNRILICAPSNRCCDGIMRSLLKVI
PESDMFRANAAFREKDEVPDDILQSCLYEDPYFSCPPTEKLKKFRVIFSTLMSSFRLHDK
GLTSGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVTGQPGDRSRWVRADMAREKGL
KISYFERLFKSRPYRSLNAMLITQLDE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttcttgaagttttgaaacgcctgtttggaattgaagatgagcatgagaat
caaattcccagacaaacttatgattataaaatttccaatagaaagtgctcgccacccttg
acttctacaaatcaatctccagcctgctataactataaacccccatcacctccatctcaa
ccagtcaaatctccctttagttcatcttcatcagcccctaagcctcggacatcatcatcg
aaaccgctgcaatcttcttatatcagtacatcttctccatctcctaaattcccaacatct
tcttcttttgatccattttcaacattctctaagcccccaacatcttcatctaagctgcct
caatcaaattttgttaatccatcttcttccaatgcatctccatttattcttgaattccca
acatctgtatctaaattacaacagtctgcttctgttgatcagcgttcagcattgcctaaa
cccccaacatcttcatcaaagctgtcccaatccactcttgttagtccatcttcaccatcc
cttcgactccaaacaccttcatctagaccatctcctcctaaactctctacatcctcctct
aaaccacctcaggcttcatcaaaatcacattcatcatcaccaaatcctccaacatcttca
aaaccatctccatcctcgggaccgcctgtgtcttccactacgctccctccaatctttaag
caagttctatccccagcctcctcagatgtaataaatgaaaaggggaagaaaagttatgta
tcggttgaaaagggttcattacctatattcgcgattcctgaggatttcaaagatttgatc
aagaatgagattgtgcctaaagttcttaaacagcctctgtctcccacgacatataaggaa
tactttgctgctctgttatactctgaagagttctaccatgagaaatgggctcatttcaat
atgaagaatgtgacactgaagttgcaaaaagcagcagtttacaaaaatctagacaaggaa
gagaaaaccttcgtagaatttgagattgattctgttcctgaaaatcggccattccttttg
tcgagggacttagtctatgtacggccatcaggtacaaatgctgagcagtttcagggcatt
ataaatcgcattattaggagcaatcttgtattagtggaatttgaagatgaattttatgat
tatcattattcgacccaaaaatatgatgtcagcttctcattcaatagagtatgtttgaaa
agagctcaccaagcagttcaaacagcatcggatactttgtttaaaaacttcctctttccc
gattgtgtttcccgtacgagcattcccactgcaccagcgctgccgtctggcagtcacaaa
cttgaccccaaacaattatctgctgtttgtcatattttaagcattcagggctcaccacct
tacttggtgactggccagctttgttttgaaaggaacgtttttaggccgtcgagaactgga
gcggttgtttgtgcagcagtgcaccagttatgtcaaacctcactcaaaaataggattctg
atatgtgctcctagtaaccgctgttgtgatgggattatgagaagcttgttgaaagtgatt
ccagagtcagatatgtttcgagccaacgctgcattccgtgagaaagatgaggtgcctgat
gacatcctccaatcatgcctttacgaagacccttatttctcttgtcctccaactgagaag
cttaaaaaattcagggtgattttctcgactctcatgagtagctttcggctacatgataaa
ggcctaacttctggacattttagtcatatttttctggtggatgcgtcctctgccattgag
ccggaaacagcagtggccttaactaattttgcagaaaaaagtactactgttatagtcact
ggtcaaccaggagatcgttctcgttgggttcgtgcagacatggcaagggaaaagggactg
aagatttcgtactttgagagactctttaagtcaaggccatatagaagcctcaatgcaatg
cttatcacacaattggacgagtag
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