Prunus avium (sweet cherry): 110762191
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Entry
110762191 CDS
T05161
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110762191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110762191
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110762191
U7-dependent histone pre-mRNA processing factors
110762191
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
Motif
Other DBs
NCBI-GeneID:
110762191
NCBI-ProteinID:
XP_021820488
UniProt:
A0A6P5T269
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MAASQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLTANVDPQKQVVGPSVHVE
ALQHQPIGLHIAITAATVMAGALGGAQAGLQSSQSGLQNQLASANDPLTLHLAKMSRGQL
NQIMSELKVMAVQNKELARQLLLARPQLPKALFQAQIMLGMVSPQTLQMPNIRQTSSQPS
QPPFNEGQQGQPPAVQTLSELPPPAQNRLQAGLVPKVREGQFSSVPQNPLVRSQLSAPQQ
HMQPRMQLPQHANQHVLQQAPLLGQSGVITLPPIHPQSSGGLPIRPQTQLANSSISNQKM
QPPLLQHPGLVGRANLGQNTQMVRPNASVHQSPFPRPLSDASFQPGPSMSSGMSLAVNRD
DDLSSESVKRPAKQMKLDDGRSTSLSAGLVSNANGSALPHVFGAGSMPGKPVPNPEEVLQ
SEKQTSQSQLPPGVESALLQQVLSLTPEKLSSLSPEQQQQVIKLQQMLRRDQIQPS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttctcagcaccgctgcgtttttgtggggaatataccttatgatgccactgag
gaacagcttatagaaatctgccaggaggttggccctgttgtatctttcagattagttatt
gatagagagactggaaaaccaaaaggttatggattttgtgagtacaaggatgaagaaaca
gcactaagtgctcggcgtaatcttcagggttatgagatcaatgggaggcaattacgagtt
gattttgctgaaaatgacaaaggtgctgaccgaaatcgagaacagggtcgtggtggacca
ggactgactgcaaatgttgatccacaaaaacaagtagtgggcccatctgttcatgtggaa
gctcttcagcatcagccaattggtctccatatagctataactgcggcgactgtcatggca
ggagctctaggtggtgctcaggctggtttgcagtctagtcaaagtggcttgcagaatcaa
ttggcatcagccaatgatcctttgacacttcatctggccaaaatgtccaggggtcagttg
aatcaaataatgtcggagctcaaggtaatggctgtacaaaacaaagaactagctcgtcag
ctattgcttgcaaggccacagttgccaaaagcacttttccaggctcaaataatgctcgga
atggtgagcccgcaaacgttgcagatgccaaatatcaggcaaacttcaagtcagccctca
cagcctccattcaatgagggccagcagggtcagccaccagctgttcaaaccctttctgag
ctaccccctcctgcacagaataggttgcaagctgggttggtgcccaaagtgcgagaaggc
caattttcttcggtacctcaaaatccattggttcggagccagttatctgcaccccaacaa
cacatgcaacctcgaatgcagcttccacaacatgcaaaccaacatgtcttgcaacaggcc
ccattgctagggcagtctggagttataacacttcctcccatacacccccagtcttcaggc
ggtttgcccattcgaccacaaactcaacttgcaaattcttctatttcaaaccagaaaatg
cagcctcctttgctacagcatcctggtctggttggacgtgccaatttggggcaaaacact
cagatggttcgtccaaatgcttctgtacatcagtctccttttcctcgccctctatctgat
gccagctttcagcctggtccctcaatgtcttcgggaatgtcactggcagtcaacagggat
gatgatttatcttccgaatcagttaagcgccctgcaaagcaaatgaagttggacgatgga
aggagtacctctttgtcagcagggcttgtgtctaatgccaatggatctgcattgcctcat
gtttttggagctggctcaatgcctgggaagcctgttcctaacccagaagaagtactgcag
tctgagaaacagacttctcagtctcagcttccacctggggtggagtctgctctactacaa
caagttttgagcctaacacctgaaaagctgagctcattgtctccggaacagcaacaacag
gtcattaaactccaacagatgcttcggcgagatcagattcagccatcgtag
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