Prunus avium (sweet cherry): 110763160
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Entry
110763160 CDS
T05161
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110763160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110763160
Spliceosome [BR:
pavi03041
]
Complex A
U1 snRNP components
U1 related factors
110763160
Complex B
110763160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
110763160
NCBI-ProteinID:
XP_021821613
UniProt:
A0A6P5T457
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MANNPQSSAAQPYRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG
IPPSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPLSQALPMQYMQTRPITSVPSQSQ
QPALPFNNQMPGLAGGGMPYSSSYMFAPPSYAQPQNNVSSSSQFQPMSQVQAHVSATGQP
WVSSGNQGAAVPTPVQQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFNR
RTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQ
VQRELAQGTHSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFS
NPSPIAPTGSSVASGAQSSITGSVGIQPPVVTVTPVAASVSGSTGVPPTLVNTNTKSVST
YENVTSQEIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYANKQEAKNA
FKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMR
QKKAREEFSKMLEESRELMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERK
EKEKAAEEHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDY
IRDLEKEEEEQKKIQKEQLRRVERKNRDEFRRLMEEHVADGILTAKTHWRDYCMKVKDLS
SYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKVAI
LEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITAASNWE
DCKHLFEETQEYRSIGEENFSREVFEEYITNLQEKAKEKERKREEEKAKKEREREEKEKR
KDKERKEKEREREKEKGKERSKKDETDSENVDVTDSHGHKEDKKREKDKDRKHRKRHQSS
MDEVGSDKEEKEESKKRRHSSDRKRSRKHTPESDSESRHRRHKREHQDGSRRNVGYGELE
DGEVGEDGEIQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaccctcagtcctcagctgcgcagccatatcggcctcctccagttgcttcc
ttgggtcctcaaagttttggttcatccccatctcttcaatatcgaccagtggttccaaca
cagcaaggacaacagtttattcaatcagcctcccaacagtttcagcctgtgggacaaggt
attcctccttcaaatgttgggatgcctgctagtcaaagtcagcaattacaattttctcaa
ccaatgcaaccgtatcctctcaggccaagtcagcctggtcatgctacacctttgtcacag
gctttgcctatgcaatacatgcagacgaggcctattacatctgtcccatcacagtctcag
caacctgccctgccttttaataatcagatgcctggcttagctggtggcggaatgccttat
tcttcatcatatatgttcgcaccaccttcatatgcccagccacaaaataatgtcagttct
tcgtcccagtttcagccaatgtctcaagtgcaagcacatgtatctgccacaggacagcct
tgggtgtcctctggtaatcagggtgcagcagttcctacaccagtacagcagtccggtcaa
caaccttcaagcactactttcacagattctgctgtaaatgttcctagccaaacacagcag
tcttcttctgattggcaagagcatacgtcgggtgatggaagaagatattatttcaacaga
agaacaaaacaatctagttgggagaaacctttagaattgatgacaccaatggagagagct
gatgcatcaactgtttggaaggaatatacttcttcagatgggaaaaagtattattacaac
aaagttacaagggaatctaagtggacaattccagaggagttaaagttggctcgtgaacag
gttcaaagagaacttgcccagggaacacattcagaaatgaatttgacttctcatgcccct
cctgctgttgcttcagctgaaacacctatgggatctagttcagttggccccagcacttct
tcagccctacctgggatggtatcgagcccagttgcagttatacccgtgtcttccttttct
aatccttcccccattgcgcctactggatcatcagttgcttctggtgcacagtcttccata
acaggtagcgttggcattcagcctcctgtggtgactgtcactccagtggctgcttctgtt
tcagggagtactggagttcctcctactttggtcaacaccaatacaaaatcagtgagtact
tatgaaaatgtaacatctcaagaaattggaagtgcagatgatggagcttttactcaagat
atcgaggaagcaaaaagaggaatggcagttgctggaaaagtcaatgtgactccttcagag
gagaaaacagttgatgaagaaccattggtgtatgccaataagcaggaggcaaaaaatgca
tttaaagcacttctggaatctgcaaatgttcactccgattggacttgggagcagacaatg
agagagatcattaatgacaaaagatatggtgctttaaaaactctaggtgagaggaagcaa
gcatttaatgagtacttgggtcaaaggaaaaaactggagaacgaagagaggcgcatgagg
cagaaaaaagctcgggaagaattttcaaaaatgttggaagagtccagggaacttatgtca
gcaaccagatggagcaaagctgtcagtatgtttgaaaatgatgaacgattcaaggctgta
gaacgagcgagggaccgggaagatctttatgagagctacattgtagaattggagaggaag
gaaaaagaaaaggcggctgaagagcacaagcagaatattgcagagtatagaaaattcctg
gaatcttgtgactttatcaaggtgaacagccagtggcggaaagttcaagatcgcttagag
gatgatgagagatgcttgcgtcttgaaaaacttgacaggttgctcattttccaggactat
attcgtgaccttgagaaggaagaagaggagcaaaagaagatacagaaggaacaattgagg
cgggttgagaggaaaaaccgcgatgagtttcgaaggctgatggaagaacatgttgccgac
ggtattcttacagctaaaactcactggcgcgattactgcatgaaggttaaagacctgtct
tcgtatgaagctgttgcatctaatacctctggttcaacaccaaaagaattgtttgaggat
gttgctgaagaattagagaaacagtatcatgaagataaagctcggataaaggatgcaatg
aagttggggaaggttaccttggcttctacactgacatttgaagaatttaaggttgctatt
ttggaagatattggtttcccatcaatatcagacattaactttaagcttgtatatgaggaa
ttattagagagggccaaggagaaggaggagaaagaagcaaagaagcgtcaacgactaggt
gacgacttcaataagctattgcacacattcaaggaaataactgctgcttctaattgggaa
gattgcaaacacctttttgaagaaacccaagaatacagatcaattggggaagagaacttt
agtagggaagtttttgaggaatatattacaaacttacaggagaaggctaaagagaaagaa
cgcaagcgagaggaggaaaaggctaaaaaagagagagagagagaggagaaagagaagcgt
aaggataaagagaggaaggagaaggagagagaacgtgaaaaagaaaaggggaaagaacgg
tctaagaaggatgaaacagatagtgaaaatgtagacgtaactgatagtcatggtcataaa
gaagataagaaaagggagaaagacaaagatagaaagcaccggaagcggcatcaaagttcc
atggatgaggtaggttctgataaggaggagaaagaagagtctaagaaacgcagacatagt
agtgaccgcaaaagatcaagaaaacatacacctgaatctgacagtgaaagtcggcataga
agacacaagagagagcatcaggatggttcccgtcgaaatgttggatatggggaacttgaa
gatggggaggttggtgaagatggggaaattcagtag
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