Prunus avium (sweet cherry): 110764602
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Entry
110764602 CDS
T05161
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110764602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110764602
Spliceosome [BR:
pavi03041
]
Complex A
U1 snRNP components
U1 related factors
110764602
Complex B
110764602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
110764602
NCBI-ProteinID:
XP_021823297
UniProt:
A0A6P5T837
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVVPAPHSQEFISVASQNFQHVGRG
VPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQ
PNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQ
VTPLQHTGERPAVITSIAPETGVRPNPAGGTVAEWREHTSAEGRRFYYNRRTGLSTWEKP
FELMTPLERADASTNWKEFTSPDGRKYYYNKVTKESRWIMPEELKLARELVEKAPVKEMQ
QEMLVNHHATVTVSPPVAEADTLVNDAQVASSPVSVAPVIATGDGDVQTAAASRSSTSPV
VASPVIENPNGVQTPVVVPSSAVSSAEAAVTINDTVAEPMESSNNLSAQDFVSSADGVPL
QENEEAMDDVTGKKINDIASEEKPVDREPISYENKLEAKDAFKALLESTNIGSDWTWDRA
MRVIINDKRYGALKTLGERKQAFNEFLVQRKKQEAEERRIKQKKAREEFKKMLDECSELT
SSTRWGKVESIFEHDERFKAVERDRDRRDMFENYVEELQKKERAKAMEERKHNIMEYRQF
LESCDFIKASSQWRKVQDRLEADERCSRLEKIDRLEFFQEYLRDLEKEEEEQRRIQKEEL
RKTERKNRDDFRKLMEEHLAAGTLTAKSHWRDYCMKVKDLPTYLAVASNTSGSTPKDLFE
DVVEELQKQYHEDKTRIKDAVKLGKVMLTSTWKLEDFKTVISNDIGSPPISDANLKLVFD
ELLERVKEKEEKEAKKRKRLADDFSHLLSSIKEITPSSKWEDYKSLLEGSQECSAIGEES
FCKEIFDKHVMQLKEQAKEKERKRKEEKEKKEKDRDDRERRRTKQRREKEVEYEREREER
LKKDGLDSEIADVTDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSS
DHKKSRRQAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggccaataaccctcagttttcaggtctacagcctcttcggcctcctatggttggttct
gttgaccctcctcgaagtttgccgcccatgtcttttcaattccggccagtagttccagca
ccacattcgcaggagttcatttctgtggcttctcaaaattttcagcatgttggaaggggt
gttccattgatgaatgttagactgcctcctccaactcaccaaccccagttttcgcaacca
atgcagcagttacctccaagatctggtcagccaggtcatggtatgctgccatcacaggcc
attccattgccagttagtcagcccaacagaaactttgcatctgaattgcccctacctcag
cctaattcacaaggtccaaataacgccatgcccaacttaggtggcccacgaacacctctc
tcttcatcatacacttttgcaccttcttcttatggtcaaatgccaagaagttttaatgac
tccacccagtatcagtctatatctcaattgcatgcacctaatgtttcatcggagggacaa
gttacacctctgcagcacaccggtgaacggcctgctgtaatcacttccattgctccggaa
acaggtgtacggcctaaccctgcaggagggaccgtggcagaatggagagagcatacatct
gctgaaggaagaagattttattacaacaggaggacaggattatctacttgggagaagcct
tttgaattgatgacaccactggagagggcagatgcatcaactaactggaaggaattcacc
agtcctgatggaagaaagtattactacaacaaagtcacaaaagaatcaagatggattatg
cctgaggaactgaagttggctcgagagctagtagaaaaggcgcctgtgaaggaaatgcaa
caagaaatgcttgtaaatcatcatgccacagtcaccgtttctccccctgtagctgaagct
gatacgctagtcaatgatgcccaagtagcatcaagtcctgtttctgtggcacctgttatt
gccactggtgatggtgatgttcaaactgctgcagcatcaagatcatctacctcacctgtt
gtggcttctcctgtaatagaaaatcccaatggagttcagacacctgttgttgtaccatct
tccgctgtgtcaagtgctgaagctgctgttacaatcaacgatactgttgcagaaccaatg
gaaagttcgaacaatttatcagctcaggattttgttagttctgctgatggagttccgtta
caggagaatgaggaagctatggatgatgtaacaggaaagaaaattaatgatattgcatca
gaagaaaaaccagttgaccgggaacccataagttatgaaaataaattggaggctaaagat
gcatttaaagcactcctggagtctaccaatattggttctgattggacttgggatcgggcc
atgagggtgataattaatgacaaaagatatggtgctctgaaaacacttggagagcgtaag
caagcttttaatgagttcttggtacaaaggaaaaaacaagaggctgaggaaagacgtatc
aaacagaaaaaggcacgggaagaattcaaaaaaatgttggacgaatgctcagagctaaca
tcgtccacaagatggggaaaagtagagagcatatttgaacacgatgaacgcttcaaagct
gttgaacgagatagagatcgcagggatatgtttgaaaactatgtagaggaactccaaaag
aaagaacgagcaaaggcaatggaggaacgtaagcacaatataatggaatacaggcaattc
ttggaatcttgtgacttcatcaaggcaagcagccagtggcgaaaagttcaagatcgttta
gaggctgatgaaagatgttcacgtcttgaaaaaattgatcgtttggaatttttccaggaa
tatctgcgggatctagagaaggaagaggaggagcagaggaggatacagaaggaagaattg
agaaagacagagcgtaaaaaccgtgatgacttccgcaaattgatggaagagcatctcgct
gcaggcactcttacggccaaatctcactggcgtgattattgcatgaaggttaaagaccta
cctacatatcttgcagttgcatcaaacacctctggttcaactccgaaagatttgtttgaa
gatgttgttgaggaactacagaaacaatatcatgaggacaaaactcgaatcaaagatgcc
gtgaagttaggaaaggtcatgcttacatcaacctggaagcttgaagacttcaaaactgtt
atatcaaatgatattggctctccacccatatcagatgccaacttaaagctagtttttgat
gagttattggaaagagtgaaggagaaggaggagaaagaagctaaaaaacgtaaacgtctt
gcagatgacttctctcatctcttatcttctatcaaggagataactccatcttctaagtgg
gaggactacaaatcacttcttgaaggtagtcaagagtgcagtgctattggtgaagagagc
ttctgcaaggagatatttgataagcatgtaatgcaactgaaagaacaagcaaaagagaaa
gagagaaaacgaaaggaggaaaaggaaaagaaggaaaaggacagagatgatagagaaagg
agacggacgaagcagagaagagaaaaagaggtagaatatgaaagagaaagagaggaacgc
cttaagaaagatggtttagacagtgagattgctgatgtaacggacattcatgattccaaa
gagaaaaagaggtccgggaaagatgataataagaaacataggaagcgccatcatagtgat
gaagatcatgccaatggaaatgagaatgatcggtctaaaagatctcatggatctagcagt
gaccacaagaaatcaagacggcaggcacctggtcatgaatcagataccgaaagcagacat
agaagacataaaagagatcaccggaatggttctcgtagaagtggtgatcacgatgagcta
gaagatggggaatttggcgatgttggggaaagtcggtag
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