Prunus avium (sweet cherry): 110766333
Help
Entry
110766333 CDS
T05161
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110766333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110766333
03036 Chromosome and associated proteins [BR:
pavi03036
]
110766333
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110766333
Coactivators
SAGA/TFTC/STAGA complex
110766333
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110766333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF4513
Motif
Other DBs
NCBI-GeneID:
110766333
NCBI-ProteinID:
XP_021825333
UniProt:
A0A6P5TD86
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDVSVSQPSDSDSAVLSQGSNNTS
SQSLPQFHTASQDENTACQTQHDQKIAQQREMHSYEMELKQYGSVAENVQQKKDASHEFN
QFSLPQKQPQGDLQQGQAEQKPLHKPETAGIPISGKIPITKHEQDITPTPESESQYLKLQ
KMSSQQAMIPEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFGKLKNNEISKDA
FVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLPPQASVQQQPPRMPSISVGSAQFTDPRSF
ALHQRGANSPTDPSHIPSSAVQVQSDSSHSVIENSAKKLREAERQSDSHGMQVSQMPSSS
AVAGNQERERSSGPPQILNKQQQQQQLHYPQSSFAMYGSTGGNYHPYSGTSINTSTLPLK
QQPHDSQLRQIPQHQGMGSTQSGGEPQGATITNVSKLERQNSLNDASRLQGGSVSHFTNN
SNLQQNSVPWQSSNKEQNPGPVSSMSYVKQEPIDQTAEQQQKPPLSNQQGLPSVSAAQLE
QGSALPGISTDESLEKQSSRMGFATSGMVTSSSTGTAPPNSVSPSIMMQVDTNVSLGHRI
PSGTSPAGISNRAPPKKPSIGQKKPLEVPGSSPPPSSKKQKLSGNFLDQSIEQLNDVTAV
SGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKAPLQKKLAEITVVKCGLKS
ISNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHHTFTTSDVRQQVMNLNQNARE
EFEKKQAEAEKLRRLNEPEVNNGVDGDKDKDDGRSKSFKPNKEEDDKMRTTAANVAARAA
VGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTSTAGRIMKDNQEAEKRGG
GTPVAAAGTFRKCGRNQVITPQTRVARSISVKDVIAVLEREPQMSRSTLIYRLFERIQSD
TTGE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacccatccattatgaagaagctccttgaagacgatgaggatgaaaccatgcattca
ggggccgatgtggaggccttccaggccgctctgaacagggacatagaaggagatgtgtct
gtttcgcagccgtctgattcagactccgcggttttgtctcaaggaagcaataacacttct
agtcagtcattaccgcagttccatactgctagtcaggatgaaaacacagcttgtcaaacg
caacatgaccaaaaaattgcacaacagcgagaaatgcattcatatgaaatggagctaaag
caatatgggtccgttgctgagaatgtacaacaaaaaaaggatgcctcacatgaatttaat
caattttctttgccccagaagcaaccccaaggtgatcttcaacaagggcaggcagagcag
aaacccctccataaacctgaaacagctggaataccgatttctgggaaaattccaatcaca
aaacatgagcaggacataacacctactccagaaagcgaatctcagtacttaaagcttcag
aagatgagtagtcaacaggcaatgatcccggagcagccaagcaacccaatgaatcgcagt
aaacaagtaccatttggcctgttactccctgtcttattgccccagcttgataaagacaga
gccatgcaacttactactctatttggtaaactgaagaacaatgaaatttctaaggatgct
tttgtccggcacattcgaagtgttgttggggaccagatgctcaaattggcagtaatgaaa
gtacaatcacagcctggtcctaaacaccagttaccacctcaggcttcagtgcagcaacaa
cctcctaggatgccatctattagtgtaggttctgcacagttcactgatcctcgctcattt
gcacttcatcagagaggcgccaactctcccacagacccatcacacattccctcttcagca
gttcaagtgcagtctgattcaagccattcagtcattgaaaacagtgctaaaaaactgcgg
gaggcagaacgtcagtcagactctcatggaatgcaagtaagtcaaatgccttcttctagt
gcggtagctggcaatcaagaaagggagcgctcctcaggccctccacaaatccttaataag
cagcagcagcaacaacagttgcactatccacaatcatcctttgccatgtatggaagtact
ggtggtaattatcacccgtattcagggacaagtatcaatacctccacattgcctctcaaa
cagcaacctcatgattcgcaactgaggcaaattccacaacatcaaggcatgggttcaact
cagtcaggtggggaaccacagggtgcgaccatcactaatgtgtccaaattggagaggcaa
aattctctgaacgacgctagtagactgcagggtggatctgtttctcactttacaaataat
tcaaatttacaacagaattcagttccttggcagtcctcaaataaggagcagaatcccggt
cctgtgtcatcaatgtcttatgtaaaacaggaaccaattgatcagactgctgagcagcag
cagaagcccccattatctaatcaacagggactgccttctgtttctgctgctcaacttgag
caggggagtgcgttacctggaatttcaacagatgagtctttagagaagcaatcttcaaga
atgggatttgcaacatctggcatggtgacttcatcttctacaggcacagcgcccccaaat
tctgtttctccttccataatgatgcaagttgataccaatgtctcgttaggccatcgaata
ccctctggaacttctcctgctgggattagtaatagagcacctccaaaaaagccttctatt
ggccaaaagaagcctcttgaagtacctggttcctcaccaccgccatcaagtaagaagcaa
aaattatccgggaactttttggatcaaagcattgaacaactgaatgatgtcactgctgtt
agtggagttaatcttagggaagaggaagagcagctgttttctggacccaaggaggatagt
cgagcttcagaagcatctcgaaagtttgtgcaagaagaagaagaaaggctgattttgcag
aaggctcccttgcagaagaaattggcagaaattacagtggtcaaatgtggtttgaaaagt
ataagcaatgatgtggagcggtgtttgtcactgtgtgtggaggaaagaatgagggggcta
ataaataatttgatcagactgtcaaagcagcgggttgatgctgagaaaccaagacaccac
acttttaccacctctgatgttcggcaacaagttatgaatctcaaccagaacgctagggaa
gaatttgaaaaaaagcaggccgaggcagagaagcttcgaaggcttaatgaacctgaggtt
aacaatggagttgatggtgataaagacaaagatgatggtcgctccaaatcatttaagcca
aacaaagaggaagatgacaaaatgaggacgacagcagcaaatgttgctgcccgagctgct
gttggaggggatgacatgttgtcgaaatggcaacttatggctgagcaagcccggcaaaag
cgtgaaggtgggattgatgtggcatctgggtcccagccaggtaaagatgtaaaccgcaag
cctacatcaacagctggtagaattatgaaggacaatcaagaagcagagaaaaggggaggt
ggaactccagttgctgcagctgggacttttagaaaatgtggaaggaaccaagttatcacg
cctcaaacaagagtggctcgtagtatatctgtcaaggatgtgattgctgtcctggagagg
gaacctcagatgtctaggtctactctgatatatcgcttgtttgaaagaatccaatcagac
accactggtgaataa
DBGET
integrated database retrieval system
