Prunus avium (sweet cherry): 110771860
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Entry
110771860 CDS
T05161
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110771860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pavi03400
]
110771860
DNA repair and recombination proteins [BR:
pavi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110771860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
APG6_N
Motif
Other DBs
NCBI-GeneID:
110771860
NCBI-ProteinID:
XP_021831906
UniProt:
A0A6P5TXY1
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSEPIILSDEEDQNALSTPFQPFHCKKRRTQLDPNPIPTVLVLDDDPTPQKQPGPISTPD
FVPETPMSDLAIVKCTKAPSHFQARVSDSEHKFPGVNGLICLESDNEPESGHARKKGKEI
ESIVSGCDVVKDLDWRFSFVESTCSLGDAELAHMSEGNFSLSTLQDDIDQVLDYPENRMD
QMGNIMKQRRTTAITDNENITKEATGRRKLTKEERTRLMEEKKLKKIQEKLQREALKAEA
AELKKIQKEKQKWEKGKFALKSIVAEIDSKVVELGSVGGNLLTRFAEKGLTYRITSNPIE
RSIVWTMTVPEHISQLSPEEIEIQYIVLVYEAEEFCNLVINESLLDNVFSVRSRYPSYTV
CYLTNRLMAYVNKREQELYKNPTNHSGRRRPPVEEALAKLTTNFFKVHSRQCIDEAELAE
HVVGLTCSLSSCQFRKKLTRLDVNANGSLIPKDCLDRNLIKKSPWSRYRPMRLLYLLLRT
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccaatcattctctccgacgaagaagaccagaatgccctctcaacccctttc
caaccattccactgtaagaaacgccgaacccaactggacccaaacccaatccctacggtt
ctggtcctcgacgacgacccgaccccacagaagcagcccggccccatctccactcctgac
ttcgtcccggagacccccatgtctgatctcgcaattgtgaaatgcaccaaagccccttcc
cacttccaagctagggtttcagactccgagcacaagttccctggtgttaatggactgata
tgtttggaatctgataatgagcctgaaagtggtcatgcaaggaaaaaggggaaggagatt
gaatccatcgttagtgggtgtgatgtggtgaaggacttagattggaggtttagttttgtc
gagtccacatgttctcttggagatgctgagctagcacatatgtctgaagggaatttttca
ctatctactttgcaagatgatattgatcaggtacttgattatccagaaaatagaatggat
cagatgggaaacattatgaagcagagaaggacaacagctattactgataatgaaaacatt
acaaaagaagcaacaggaagaaggaagctgacaaaagaggaaagaacgcgcttaatggaa
gaaaagaagctaaagaagatacaagagaaattgcaaagagaagctctgaaagctgaagca
gcagagttgaaaaaaatacagaaagaaaagcaaaagtgggaaaaagggaagtttgcccta
aaatccatcgtggccgagattgattctaaagtagtggagttggggtcagttggaggaaat
ttgcttacaaggtttgctgaaaaggggctaacataccgtataacatcaaatccaattgaa
agatcaattgtctggaccatgactgtcccagaacatatttcacagctttctcctgaagaa
atagagattcaatatatagtgctcgtgtatgaagctgaagagttttgtaaccttgtcatc
aatgaatctcttttggataatgtttttagtgttcgaagtcgttatccatcatatacagtg
tgttatcttacaaataggttgatggcatacgttaataaaagggaacaagagctgtacaag
aacccaacaaatcatagcggccggagacgcccacctgttgaggaggcgctcgcaaaattg
accactaatttttttaaagtacactccaggcagtgcatagatgaggctgaacttgctgaa
catgttgttggtttaacatgcagcctgtcatcctgccaatttagaaagaagttaacgaga
ctggatgtaaatgctaatggatcccttatccctaaggactgccttgaccgaaatttaatt
aaaaagagcccatggtctagatataggccgatgaggttgctctatctccttttgaggacg
gtttga
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