Pseudomonas avellanae: BKM03_21900
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Entry
BKM03_21900 CDS
T05369
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pavl
Pseudomonas avellanae
Brite
KEGG Orthology (KO) [BR:
pavl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pavl03029
]
BKM03_21900 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pavl02000
]
BKM03_21900 (bamA)
Mitochondrial biogenesis [BR:
pavl03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
BKM03_21900 (bamA)
Transporters [BR:
pavl02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM03_21900 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
ShlB
YqfD
Motif
Other DBs
NCBI-ProteinID:
AVB21568
UniProt:
A0A6H3CMR4
LinkDB
All DBs
Position
4566690..4569062
Genome browser
AA seq
790 aa
AA seq
DB search
MIYSRLLVSLCLLFSVPLVHADTFAIADIRVNGLQRVSAGSVFAALPLNVGDQADEQRLA
DSARSLFKTGFFQDIDVARDGNVLVINVVERPSIASIEIEGNKAISTEDLMKGLKQSGLT
EGEIFQRATLEGVRNELQRQYVAQGRYSASVEAQAVPAPRNRIALKIIIDEGTVASIQHI
NVVGNTVFSDEELSDQFQLKTSNWLSFFKNDDKYAREKLSGDLERLRSWYLDRGYINMDI
NSTQVSLTPDKKSVFITVNITEGARYTVASVKLGGDLKVPQDQLEQLILVKPGQVFSRKV
MTDTTNLITRRLGNDGYTFANVNGVPKPNDADHTVDVSFVVDPGKRAYANRINFRGNTKT
ADEVLRREMRQMEGGWASTYLIDQSKVRLERLGFFKEVNVETPAVPGTDDQVDINYAVEE
QASGNITASVGFAQSAGLILGGSISQNNILGTGNFASLGMTRSEYQTKYNFAFTNPYFTP
DGVSLGYNVFYNATDYSKYYDDSDEVSYYSLNSVGAGVNLGYPINETSRLTYGLSIQHDS
LDPGSYSADEIYDFIEREGSEFTNLKASIGWSESTLNKGVLATRGHSQSLTMTTTVPGSD
LQFYKIDYNGQTFLPLGDTTSLRLHTKLGYGNGYGDTDGLPFYENYTAGGQSTVRGFKDG
TLGPRNTPSTGTYASQGQIYYSDRDTEALGGNILITGGMEYLFPMPFIKDQKSLRTSLFW
DFGTVYSDKCYLTTTQNCGNINIDQMASSVGVGVTWYSPLGPLSFDLAVPVKKPEDAETQ
VFQFSLGQTF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatttattcgcgcctgcttgtatcgctttgtctgttattcagcgttccgctggttcac
gccgacacttttgccatcgccgacatccgcgtcaacggcctgcaacgggtgtccgccggc
agcgtatttgctgcactgccgctcaatgtcggtgatcaggcagacgaacagcgcttggcc
gactctgcccgttcattgttcaagaccggtttctttcaggacatcgacgttgcgcgtgac
ggcaatgtgctggtgatcaatgtagtagagcgcccgtccattgccagtatcgagatcgaa
ggcaacaaggccatcagcaccgaagaccttatgaaagggctcaagcaatcaggcctcacc
gagggcgagatcttccagcgcgccacgctggaaggcgtgcgcaacgagttgcaacgccaa
tacgtcgcccagggccgctacagcgcttcggtcgaggcccaggccgtgccagcaccgcgc
aaccgcatcgccctgaaaatcatcatcgatgagggcacggtcgcctccattcagcacatc
aacgtggtcggcaacacggttttttcagatgaggagctgtccgaccagtttcagctcaag
accagcaactggctgtcgttcttcaagaacgacgacaagtacgcccgcgaaaaactctcc
ggtgaccttgagcgcttgcgatcctggtacctggatcgcggctacatcaacatggatatc
aattcgactcaggtgtcgctgacgcccgacaagaagagcgtattcatcaccgtcaatatc
accgaaggcgcacgatacacggtggccagcgtcaagttgggcggcgacctgaaagtgccg
caagaccagcttgaacagctgatattggtcaagccgggccaggtgttctcgcgcaaggtc
atgaccgacaccaccaacctgatcacccgccgcctgggcaacgacggctatacctttgcc
aacgtcaatggcgtgccaaagcccaacgacgccgaccacacggtggacgtcagtttcgtg
gtcgatcccggcaaacgcgcctacgccaaccggatcaatttccggggcaacaccaagacc
gccgatgaagtgctgcgccgtgaaatgcgccagatggaaggcggctgggcgtctacttat
ctgattgaccagtcgaaggtgcgcctggagcgtctgggctttttcaaggaggtgaacgtc
gagacgccagcggtcccgggcaccgacgatcaggtggacatcaactacgccgtcgaagag
caggcctcgggcaacatcaccgccagcgtaggctttgcgcagagcgccgggctgatcctc
ggtggctccatctcgcagaacaacatcctgggcaccggcaacttcgccagcctgggcatg
acgcgctccgagtaccagaccaagtacaacttcgccttcaccaacccgtacttcacaccc
gatggcgtcagcctgggctacaacgttttctacaacgcaaccgactacagcaagtattac
gacgacagcgacgaagtttcttactactcgctcaacagcgtcggtgccggggtcaacctc
gggtacccgatcaacgaaacctcgcgcctgacctacgggctgtcaatccagcacgacagc
cttgacccgggcagctatagcgccgatgaaatctacgatttcatcgagcgcgagggttcg
gaattcaccaacctcaaggccagtatcggctggtcggaatcgaccctcaacaaaggtgtg
ctggccactcgtggccactcgcaaagcctgaccatgaccaccaccgtgccgggcagcgac
ctgcagttttacaagatcgactacaacggccagaccttcctgccgctcggcgacaccacc
tcgctgcgcctgcataccaagctgggctacggcaacggttacggcgacaccgacggcctg
cccttctacgaaaactacaccgcaggcgggcagagcacggtgcgtggtttcaaggacggc
acactggggccgcgcaatacgccgtctaccggcacctacgccagccaggggcagatctac
tattctgaccgcgacaccgaggcgctgggcggcaacatcctgattaccggcggcatggaa
tacctgttcccgatgccgttcatcaaggaccagaaatccttgcgcacctcgttgttctgg
gacttcggtacggtctattcggacaagtgctacctgaccaccacgcagaactgcggcaac
atcaatatcgatcagatggccagttcggtgggcgtcggcgtgacctggtattcgccactc
gggccactcagtttcgacctcgccgtgcccgtcaaaaagcccgaagacgccgagactcaa
gtgttccagttctcgctgggccagactttttag
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