Photorhabdus asymbiotica: PAU_02769
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Entry
PAU_02769 CDS
T00941
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pay
Photorhabdus asymbiotica
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pay01002
]
PAU_02769
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pay01011
]
PAU_02769
Peptidases and inhibitors [BR:
pay01002
]
Cysteine peptidases
Family C82
PAU_02769
Peptidoglycan biosynthesis and degradation proteins [BR:
pay01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PAU_02769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CAQ84859
UniProt:
C7BQ84
LinkDB
All DBs
Position
complement(3196858..3198564)
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AA seq
568 aa
AA seq
DB search
MVKRVIKPLRISVICSTLVVAGYALANDQSSSIEGDIQNLSKIQSEKISETIIPEQVHIQ
TAAISETESREMLRSWLPVQVKPVFFDRLVSLYSANQMQPLWQNKDAVQRFEQQLSELAL
AGFQPQFGQWLTELNNSQLSHMGRDIILSDAMLGYLQFVSDVGQQGQNWLYRTTPYKIVL
PSPVVIDQWQQAIAGSNIVAYVTALAPQHPQYENMRKEMMKQLADSKPWPQLSDKGVLRP
GQSSSDVTALREVLIRIGMLDELTTKSDNTYSPELVATVRNFQQWQGLAPDGVIGKRTRD
WLNTSPQDRAGLMALNIQRLRIIPGHVSTGIMVNIPDYSLQYYLNEQEVLNSKVIVGRPS
RKTPIMNNVLNNVVINPPWSVPTSLARKDIAPRGVNDPGYFQRRGYVIFSSWRADASVID
PYTIDWNVVTPANFPYRIWQAPGPTNSLGRYKFNMPNSDAIYLHDTPNHGLFDKDIRAIS
SGCVRVNKASELASMLLGDAGWNQNRVSNTLKQGNTAYVNIPQRIPVYLYYLTAWVDELG
VAQYRTDIYDYDNSVRQGSQFLSKLLPL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaagagtaataaagccactgcgcatttcggttatttgcagtacattggtggta
gctggatatgctttagctaatgatcagagtagctcgattgaaggtgatattcaaaatctg
tcaaaaatacagtctgaaaagatatctgagacgataatacctgaacaagtgcatattcaa
actgctgcgatttcagaaacagaaagtcgtgaaatgcttcgaagctggttaccagtacaa
gttaagcctgttttctttgaccgattggttagtctgtactccgctaaccagatgcaacct
ttatggcagaataaagacgccgttcaacgttttgaacaacaactttcagaacttgcattg
gcgggctttcaaccgcaatttggtcaatggctgactgaactcaataattctcaattaagt
catatgggacgcgatatcatcttatcggatgctatgctgggttatttacagtttgtctca
gatgtcggccagcagggccaaaactggctttatcgtactacgccatacaaaattgtttta
ccttctccagtcgttatagaccagtggcaacaagctattgcaggtagcaatatagttgct
tatgtcaccgcattggcaccacaacatcctcaatatgaaaatatgcgtaaggagatgatg
aagcaactggctgatagtaaaccctggccacaactttctgacaaaggagtattaaggccg
gggcagagtagctctgatgttacggcgttacgagaagtacttatccgtatcggtatgttg
gatgaactgacaaccaaatcagataatacctacagccctgaattggtcgcgacggtgaga
aattttcagcaatggcaagggttggcaccagatggtgtgattggcaaacgcacaagagat
tggctgaatacttcacctcaagatagagctggattgatggcacttaatatccagcgcctg
cggataatccctggtcatgtatccacagggattatggtcaatattcctgattattcatta
cagtattatcttaatgagcaggaggtgctgaactcgaaagttattgttggtcgcccaagc
cgtaaaacacccattatgaataatgtgttgaataacgtggtgattaatcctccctggagt
gtaccaaccagtctggcaagaaaagatattgcaccacgaggagttaatgatcccggatat
ttccagcgccgtgggtatgttatcttttcaagctggcgtgctgatgccagtgtgatcgac
ccttatacaattgattggaatgtggttacacccgctaattttccttatcggatatggcaa
gcgccggggccgactaattcattaggtcgctataaattcaatatgccaaattctgatgct
atctatttgcatgatacgccaaaccatggtctatttgacaaagatattagagcaattagt
tccggttgtgtccgggttaacaaagcttcggaattggcaagcatgttattgggagatgcc
ggttggaaccagaatagagtgagtaatactctgaagcagggtaatacagcttatgttaat
atcccgcagcgtattcctgtttatttgtattatttgaccgcctgggtagatgagcttgga
gtcgcacagtaccgcaccgatatttatgattacgataacagtgtgagacaaggttcccag
tttttgtcaaagttattacctttataa
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