Cutibacterium acnes TypeIA2 P.acn33: TIA2EST2_06150
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Entry
TIA2EST2_06150 CDS
T01656
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
paz
Cutibacterium acnes TypeIA2 P.acn33
Pathway
paz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TIA2EST2_06150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paz03021
]
TIA2EST2_06150
03019 Messenger RNA biogenesis [BR:
paz03019
]
TIA2EST2_06150
Transcription machinery [BR:
paz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TIA2EST2_06150
Messenger RNA biogenesis [BR:
paz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TIA2EST2_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
AAA_22
AAA_25
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEW79317
LinkDB
All DBs
Position
complement(1323957..1325858)
Genome browser
AA seq
633 aa
AA seq
DB search
MTQTSQPDGSLDLSTKLLPELRSIATQMGIKGARGMRKADLIAAISEGGYPGVGRPAERQ
NRGQESGTSSDEGRQQRTQRRRRAEASEDSEFNKSAGGKKTPSVGDLLDAAEAQKQAETA
KKPDDQDPGQQDGGADRPGRERGDRSRRGDSPRRRARNTSRENSNSNSGDSNINDEVGAR
LEALSRGQRGERNQSDRGPQHDHNNDSSVDSDDEYGRFSEYGNGGRRSRRRRQRDRQNRR
KRSNDRYSDSEPNVREDDVLVPCSGILDIRDQYAFVRTSGYLPGANDAYVSMAIVRRHRL
RKGDVIVGQMRAHREGERREKFAPLVKIEQVNGVDPEQMKQRPEFSKLTPLYPQERLRLE
DDPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSIANSITRNNPEVHLMVVLVDE
RPEEVTDFQRTVSGEVVASTFDRPADDHTQLSELAIERAKRLVELGHDVVILLDGITRLG
RAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIEHGGSLTILATALVETGSKMDEVI
FEEFKGTGNMELRLRREFANKRLFPAIDVDASGTRREELLLSREETAIMWKLRRVLSGLE
GSQALEMMLSRLRKTQTNVEFLYTISKTTPNQD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaaacctcacagccggatggatccttggatctgtccactaagttgctccccgag
cttcgttctatcgctactcagatgggaattaagggagctcgtggtatgcgcaaggctgac
ctcatcgcggctatctctgaagggggatatccgggagtcgggaggccagctgagcgtcag
aatcgcggtcaggaatccggtacttctagtgatgagggccggcaacagcgcacccagcga
cgccgtcgcgcggaggcttctgaggactccgaattcaataaatctgcaggggggaagaaa
actccgtcggtaggcgacctactcgacgccgccgaggctcagaaacaagcggaaacagcc
aagaaacctgacgaccaagatccgggtcagcaggatggcggagctgatcgcccgggccgt
gagcgcggtgaccgcagtcgtcgaggcgattcacctcgacgacgagcccgcaatacctca
cgagaaaattccaacagcaattctggcgatagcaacatcaacgacgaggttggtgcccgg
cttgaagcgctgtctcgcggtcaacgcggtgaacgtaaccagtccgatcgtggccctcaa
catgatcacaacaacgactcttctgtcgattccgacgacgagtacggtcggttctcggaa
tacggcaatggcgggcgacgttctcgccgccgtcgccagcgtgaccgtcaaaaccgtcgc
aagcgttctaacgaccgctactccgattcagaaccgaatgtgcgtgaggacgacgtcctt
gtcccgtgctcgggcatcctcgacattcgtgaccagtatgcctttgtgcgcacttcggga
tatcttcctggcgccaatgatgcctatgtctcgatggctatagtgcgtcggcaccgcctg
cgcaaaggcgacgtcatcgtcggtcagatgcgtgctcatcgcgaaggggagaggcgtgaa
aagttcgcgccgctggtcaaaatcgagcaggttaatggtgttgatcccgagcagatgaag
cagcgtccggagttttctaagctcactccgctgtatccgcaggaacgtctgcgtctcgag
gacgaccccaaaaacatgactgggcggatcatcgatctcgtcagtccgattggtaaaggc
cagcgcggtctcatcgtttcgcctccaaaggctggcaagacgatgatcatgcaatcgatc
gcaaactcgatcactcgcaataaccccgaagttcacctcatggtggtgttggtcgacgag
cgccccgaggaggtcactgacttccagcgcactgtcagcggcgaggtcgtcgcatcgact
ttcgaccgccctgctgacgaccatactcagctgtccgagctggccatcgagcgtgccaaa
cgtctcgtggagcttggtcacgacgtcgtcatcttgctggacggcatcactcgtctggga
cgtgcgtacaacttggctgcccctgcttccggtcggatcctttccggtggtgtcgactca
gctgctctgtacccgccgaagaagttctttggcgctgctcgtaatatcgaacacggtggg
tccctgacgatcctcgccaccgctctggttgagaccgggtcgaagatggacgaggtgatc
ttcgaggagttcaaaggcactggcaatatggagttgcggctccgtcgcgaatttgccaat
aagaggctgttccctgctatcgacgttgacgcatccggtacccgtcgcgaggaattgctg
ctgtcgcgcgaggagacagcgattatgtggaagctgcgcagagtgctgtctggtctggaa
ggctctcaggctctcgaaatgatgctttcgcggctacgtaagacacaaacgaacgtggag
ttcttgtacaccatttcgaagacgacccctaaccaggattga
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