Pseudomonas azotoformans: AYR47_24040
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Entry
AYR47_24040 CDS
T04879
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pazo
Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_24040
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYR47_24040
Archaeal homologous recombinant proteins
AYR47_24040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Snapin_Pallidin
ABC_tran
nSTAND3
AAA_15
ATS
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AMN81187
UniProt:
A0A127I3D5
LinkDB
All DBs
Position
5256950..5260588
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEARDAHKQLQDQATGVVPLAPEARVELDQQFD
AAQQQLKTQQAQLKQLELQHTWLKELREWQERQLAATEQLQRAQADWDNQGQQREDLSRL
DQLAPQRHQFARQAELGSVLAPLAVQIQSHIQQQGELHTRQEQARQQQASAQTALAEALK
NQTDAVPLLRQAFEEQSTLAHLTKELAKRTEDQQQHESACAEGQAHLTALLEKQNHVTER
LQRLGTELERSAALAPLSDAWTAYRDRLQQLTQIGNRLNKGQAELPQLEQRATSAAEQFA
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDNQQQLDQHAAS
LTHKLTDAQRQREQLNQTGLQTKAELTVAEQTLNVTKQLLERQRLARSSSVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDENEEATALKAVDSLKEKLTELRGEVGGLIAQQ
KEYLQQQEHLATQQQALQPSLDAHPLAASMLNQEPAKRSAWLEQQLGQLSQSIAQDEQRQ
SALLNLQQNAGRLQQQLQAAQEASQQARQLMVDQQRELTSDRERLDQELSAFASLLPAET
LEGLRAEPAATFMQLDQQVSQRLEQLGHQRDELAEQHERQQVIEKEQTHQQHRQQQLDAL
RQQVTELAIQQQAAQAKLSTLLGEYTSAEHWQQQLEQAVTQSRQSETDASKQLQEIHNAL
VQLAADLKAKQEREQALQAEQKALVTRISEWRALHPELDDAGLNRLLAYDDAQVSQLRQQ
VQLCEKAVEQAKVLLQEREQRLADHQALHNGNLAAEELDSTLATLNQQLAESEKHCAELR
ARQSEDQRRQDANQAFAEQIAKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctggcttctctggccggcccgtttgaaatc
gactttactgccgagcccctggccagtgccgggttgttcgcgattaccgggccgaccggc
gcgggtaaaagtaccctgcttgatgccttgtgcctggcgttgtttggcgcggtgccacgc
ctgggcgacaccggccaggcgaagatgccggatgccgacagcgacatttccatcggtgac
ccgcgcaccttgttacggcgcggtaccggtggcggttatgccgaagtggattttgtcggc
gtgagtggccggcgctatcgcgcgcgctgggaagccaatcgcgcccgtgacaaggccagc
ggcaagttgcagaacagccggcagagcctgattgacctggacagcgaccaactgctggcc
agccagaaaaccgaatacaaaacccagctggaactggccctgggcctgaacttcgaacag
ttcacccgtgccgtcttgctcgcgcagagtgagttcagcgccttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgacaccgccctgtacacccaactcggg
cggcgcgcgttcgacaaggccaaagaggccagggatgcgcacaagcagctgcaggaccag
gccaccggcgtggtgcccctggcgcccgaagcacgtgtggagctggatcagcagttcgat
gccgcacaacagcaactcaagacccagcaagcgcaactcaagcaacttgagcttcagcac
acctggctcaaggagctgcgcgaatggcaggaacgtcaacttgctgccaccgaacaactg
cagcgcgcgcaggccgactgggataaccagggccagcaacgtgaagacctgagccgcctt
gaccaattggcgccacagcgtcaccagtttgcgcgccaggccgaactcggcagcgtgctt
gccccgctggccgtgcagattcagtcgcatatccaacagcaaggcgaactgcatacccgc
caggagcaggcccggcaacaacaagccagcgcgcaaactgcgttggctgaggccctgaaa
aaccaaacggatgcagtgccattactgcgacaggcgtttgaagagcaaagcaccctcgcc
cacttgaccaaggagctggccaagcgcaccgaggaccaacagcaacacgaaagcgcctgc
gccgaaggtcaggcccacctcactgcgctgctggaaaagcagaatcacgttactgagcgc
ctgcaacgcctgggcaccgagcttgagcgcagcgccgccctcgcgccgctgagcgatgcc
tggaccgcctaccgcgatcgcttgcaacagctgacgcagatcggcaatcgcctgaataaa
ggccaggccgaactgccgcaattggagcaacgtgcgaccagcgccgccgagcagttcgct
cagcaacgcgaagccctggacctgctgtatcaggaggccggtgcagagcctcacgccgtg
gccgagcagatccagttgctggcgagcctgctgcaagacaatcgcaaacagcagcgcgcc
tttgaagacctgacgcgcctgtgggacaaccagcaacagctggaccaacacgccgccagc
ctgacgcacaagctcaccgacgcccaacggcaacgcgaacaactgaaccagaccggtctg
caaaccaaggccgaactgacggttgccgaacagacgctgaacgtgaccaagcaactgttg
gaacgccagcgcctggcccgcagctccagcgtcgaggagttgcgcgagcagttgcaggac
gaccaaccttgcccggtgtgcggcagccacgaacacccgtatcaccagcccgaagcgttg
ctgcaaagcctcggtcgacatgacgaaaacgaagaagccaccgcgctgaaagccgtggac
agcctcaaggaaaaactcacagagttgcgcggcgaagtgggcggtttgatcgcccaacaa
aaggaatacctgcaacagcaggaacacctggccacgcaacagcaagccctccagccaagt
ctggatgcgcacccgctggccgcgtcaatgctcaaccaggaacccgccaagcgtagcgcc
tggcttgaacagcaactgggccaactgagccaaagcatcgcccaggacgaacaacgccaa
agcgccctgctcaacctgcaacaaaacgccgggcgcttgcagcagcaactgcaagcggcc
caggaagccagccagcaggcccgtcaattgatggtcgatcagcaacgcgagctaaccagc
gaccgcgaacgcctcgaccaggaactgagcgcgttcgccagcctgctgcccgcagaaacc
ctggagggtttgcgcgccgagccggccgccacctttatgcagctggaccagcaagtcagc
cagcgcctggaacagttgggccatcaacgcgatgaactggccgagcaacacgaacgccaa
caggtgatcgagaaggaacagacccaccagcagcatcgtcagcagcaactcgacgccctg
cgccagcaggtcaccgagttggcgatccaacagcaagcagcccaggcaaaactcagcacg
ttactgggcgagtacaccagcgccgaacactggcagcagcaactggaacaggccgtgacc
cagtcacgccaaagcgaaaccgacgccagcaaacagttgcaggaaatccacaacgcgctg
gtccaactggcggcggacctcaaggcaaaacaggaacgcgaacaggcgttgcaggccgaa
caaaaggccctcgtcacgcgtatcagcgaatggcgcgccttgcatccggaactcgatgac
gctggcctcaaccgcttgctggcctacgatgacgcccaggtcagccaattgcgccagcag
gtgcagctctgcgaaaaagccgtcgaacaggccaaggtactgctgcaagaacgcgaacaa
cgccttgccgaccatcaggccctgcacaacggcaacctcgcagccgaagagctggacagc
accttggccacgctcaatcagcaactggccgagagtgaaaaacactgcgctgaactgcgc
gcacgccaatccgaagaccagcgtcgccaggacgccaaccaggccttcgccgagcagatc
gccaaggcctatgacgagtggcaacgctgggcacgcctgaacgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcttacaacctcgacttgttggtgcatcac
gccaacgtgcaactgcgccagttggtgcggcgttatcgcctcaagcgtggcggcagcatg
cttggcctgttggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcgttg
tccggcggcgaaaccttcctggtgtcactggcgctggccttggggctggcgtcgatggcc
tccagcacgttgaagatcgagtcgctgtttatcgatgagggctttggcagccttgaccca
gaatccttgcaattggcgatggacgcgctggatggcttgcaggctcagggtcgtaaagtg
gcggtgatctcccacgtgcaggaaatgcacgaacgcattccggtgcagatccaggtcaag
cgccagggcaatggtttgagcaccttggaggtcaagtga
DBGET
integrated database retrieval system