Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1318
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Entry
PSEBR_a1318 CDS
T01472
Name
(GenBank) Urea carboxylase (Allophanate hydrolase subunit 2)
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00220
Arginine biosynthesis
pba00791
Atrazine degradation
pba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
PSEBR_a1318
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
PSEBR_a1318
Enzymes [BR:
pba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
PSEBR_a1318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
RimK
HlyD_3
HlyD_D23
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
NPCBM
Motif
Other DBs
NCBI-ProteinID:
AEA67506
UniProt:
F2KE29
LinkDB
All DBs
Position
complement(1619958..1623587)
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AA seq
1209 aa
AA seq
DB search
MFEKILIANRGAIACRILRTLRELKVEGVAVYSQADAASLHILQADEAHCLGEGAAAGTY
LAVDKLLAIAKSSGATAIHPGYGFLSENAAFAQACEAAGIAFIGPTPEQLRVFGLKHTAR
DLARRHGVPLLEGTELLDSLDAALLAGTQLGYPVMLKSTAGGGGIGMRVCRSAADLSESF
ETVKRLGQNNFSDAGVFIEKYIERARHLEVQVFGDGLGQVIALGVRDCSVQRRNQKVLEE
TPAPNLPEGMADELCAAAIQLAQAVNYRSAGTVEFVFDSDAGRFYFLEVNTRLQVEHGVT
EQVWGVDLVRWMVQLAAGDLPPLSELGQGLKAEGHAIQARLYAEDPGRDFQPSPGLLTAV
RFPQADGKALRIDTWVEAGCQIPPYFDPMIAKVIRWAPTREQARLGLHQALDESLLYGVE
TNRHYLQQILLDTPFASGQPWTRCLEALVYRANTVEVLSPGTQTSVQDYPGRLGYWAVGV
PPSGPMDSRSLRLGNRLLGNAEGAAALEITMNGPLLRFNCAARVAVTGAVIALTLDGEPV
PMNTPLSIAAGATLAIGNISGAGARSYLCLQGGVQVPDYLGSKSTFTLGQFGGHGGRALC
TGDVLHLAPLDEHAMLPPTSAPILELPSVRQIRVIYGPHGAPEYFTERYIQTFFDTAWEV
HFNSSRTGVRLIGPKPEWVRADGGEAGLHPSNIHDNPYAIGAVDFTGDMPVILGPDGPSL
GGFVCPVTVIEADLWQLGQLKAGDKVRFVPVDISTARSLALKWDHCGSEPARDEVDAVSD
LAPSRASSLPQGMVSPVVLDIGQDDTRLVARLAGDTHLLLEIGAPELDLVLRFRAHALMQ
ALEHKYLPGVIDLTPGIRSLQVHYQPEQMPLADLLNIVAGEWDAVCAAQDLQVPSRIVHL
PLSWDDPACQLAIEKYMTTVRKDAPWCPSNLEFIRRINDLPNLDEVQRTVFDASYLVMGL
GDVYLGAPVATPLDPRHRLVTTKYNPARTWTAENSVGIGGAYMCVYGMEGPGGYQFVGRT
LQMWNRYRDVAAFDGKPWLLRFFDQIRFYPVSADELLRIRRDFPLGRFDLEIEHSQLNLA
DYQRFLVQEADGIAAFRQRQQGAFDAERERWIASGQAHFDSEEPAIAPSEDSPLTDGQLS
VDSHIAGNLWQVQVDVGARVAAGDVLVILESMKMEIPLLAPSAGVVREVRVQPGSAVRAG
QRVVVLDRD
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaatcctgatcgccaaccgtggcgccatcgcctgccgcatcttgcggacc
ttgcgtgagctgaaggtcgaaggcgtcgcggtgtattcccaggccgacgccgccagcttg
catatcttgcaggccgatgaagcccactgcctgggcgaaggcgcggcggccggtacttac
ctggcggtggacaagcttttggcgattgctaaaagcagcggcgcgaccgcgatccatccc
ggctacggctttctctcggaaaacgccgccttcgcgcaagcgtgcgaggccgctggcatc
gccttcatcggtccgacgccagaacaactgcgcgtgttcggcctcaagcacaccgcccgc
gacctggcgcgccgacatggtgtgccactgctcgaaggcaccgaactgctcgacagcctc
gatgccgcgctattggcgggcactcagctcggctatccggtgatgctcaaaagtaccgcg
ggcggtggcggcatcggcatgcgtgtgtgccgcagcgccgccgacctgagcgaatccttc
gaaaccgtgaagcgcctgggccagaacaacttcagcgacgccggagtgttcatcgagaag
tacatcgaacgcgcgcggcatctggaagtgcaggtattcggcgatggcctgggccaggtg
atcgccttgggcgtgcgcgactgctcggtgcaacggcgcaaccagaaagtcctcgaagag
accccggcgccgaacctgcccgagggcatggccgatgaactctgcgcagcggcgatccaa
ctggcccaggccgtgaactaccgcagcgccggcaccgtggagttcgtgttcgacagcgac
gcggggcgcttctatttcctggaagtgaacacccgcctgcaagtggagcacggcgtcacc
gagcaggtgtggggcgtggacctggtgcgctggatggtgcaactggcggccggtgatttg
ccgccactgagcgaactgggccaaggtttgaaagccgagggccacgcgatccaggcgcgc
ttgtatgccgaggacccaggccgggatttccagccaagcccggggctgctgactgcggtg
agatttccccaggccgacggcaaggcactgcgcatcgacacctgggtcgaggccggttgc
cagatcccgccctacttcgacccgatgatcgccaaggtcatccgctgggcgccaacccgc
gagcaggcacgcctgggcttgcatcaagcgctggacgaaagcctgttgtacggcgtcgag
accaaccgccactacctgcaacagattctcctcgacacaccgtttgccagcggccagccc
tggacccgctgcctggaagcgttggtctatcgcgccaacaccgttgaagtgctcagcccc
ggcacccagaccagcgtccaggactatcccggccgcctcggttattgggcggtgggggtg
ccgccgtcgggaccgatggacagccgttcgttgcgcctgggcaatcgcctcttgggcaac
gcagaaggcgcggcggccttggaaatcaccatgaacgggccgctgctgcgcttcaactgc
gccgcgcgggtggcggtgaccggtgcggtgattgccctcacgctcgacggtgaaccggtg
ccgatgaacacgccgttgtcgattgctgccggcgccaccctcgccatcggcaacatctct
ggggccggggcgcgcagctacctgtgcctgcaaggcggcgtgcaagtgccggattacctg
ggcagtaaaagcaccttcaccctcggccagttcggcggccatggcggacgggcgttgtgt
accggtgacgtgttgcacctggcaccgctggatgagcacgcgatgctgccgccaacgagc
gcgccgatcctggaactgccaagcgtgcggcagatccgcgtgatctacggcccgcacggc
gcgcccgaatacttcaccgagcgctacatccagacgttcttcgacacggcctgggaagtg
cacttcaactccagccgcaccggcgtccgcctgatcgggccgaaacccgaatgggtccgc
gccgacggcggcgaggctgggctgcacccttccaatatccatgacaacccctacgccatc
ggcgccgtggacttcaccggcgacatgcccgtcatcctcggccccgacggcccgagcctg
ggcggtttcgtctgcccggtgacggtgatcgaagcggacctctggcagttggggcagctc
aaggcgggggacaaggtgcggtttgtgccggtggatatctccaccgcccgatctctggcc
ttgaaatgggatcactgtgggagcgagcctgctcgcgatgaagtcgatgcggtgtctgat
ctggccccatcgcgagcaagctcgctcccacaggggatggtgtcgcccgtggtgttggat
atcggtcaggacgatacccgcctggtcgcgcgcctggccggcgacacccacctgctgctg
gaaatcggcgcccccgaattggacctggtgctgcgctttcgcgcccatgccttgatgcag
gcgttggaacacaaatacctgcccggcgtgatcgacctgacgccgggcattcgctcgctg
caagtgcactaccaacccgagcaaatgcccctggccgatctgctgaatatcgtcgccggt
gagtgggatgccgtgtgcgccgcgcaggacctgcaagtgccgtcgcgcatcgtccaccta
ccattatcctgggatgatccggcctgtcagttggccatcgaaaaatacatgaccacggtg
cgcaaggacgcgccctggtgcccgagcaacctggagttcatccggcgcatcaacgacctg
cccaacctcgatgaagtgcaacgcacggtgttcgacgccagttacctggtgatgggcctg
ggggacgtctacctcggcgcgccggtcgccacgccgctcgacccgcgccatcgactggtg
accaccaaatacaacccggcccgcacctggaccgcggaaaactcggtgggcatcggcggc
gcctatatgtgcgtgtacggcatggaaggtcctggcggctatcagttcgtcgggcgcacg
ttgcagatgtggaaccgttatcgggacgtcgccgccttcgacggcaagccctggctgctg
cggttcttcgaccagatccgcttctatccggtcagcgccgatgaactgctgcgcatccgt
cgggacttccccctgggccgcttcgatctggagatcgagcacagccagctcaacctcgct
gactaccagcgtttcctggtgcaggaagccgacggcatcgccgcgttccgccaacggcaa
caaggcgccttcgacgccgagcgcgagcgttggatcgccagtggccaggcgcacttcgac
agtgaagaaccggccatcgcaccgagcgaagattcgccgctgactgacggtcaactgagt
gtcgacagccacatcgccggcaacctctggcaggtgcaggtagacgttggcgcacgggtc
gccgccggtgatgtgctggttattctcgagtcgatgaaaatggaaatcccgctgcttgca
ccctcggccggcgtggtgcgcgaggtgcgcgtccagccaggttcggcagtgcgcgccgga
cagcgcgtcgtggtgctggaccgtgactga
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integrated database retrieval system
