KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3318
Entry
PSEBR_a3318       CDS       T01472                                 
Name
(GenBank) hemolysin co-regulated protein; type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025  Biofilm formation - Pseudomonas aeruginosa
pba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSEBR_a3318
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSEBR_a3318
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pba02044]
    PSEBR_a3318
Secretion system [BR:pba02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSEBR_a3318
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AEA69634
UniProt: F2K7P3
LinkDB
Position
4102906..4103403
AA seq 165 aa
MDAIILDLGGDIKGDSLLEGFTDKIEVMSYSHNVAMQVTNDVSNSERTSGRPHIGEFTLT
KFVDSSTPTLNEYCCAGKPIPQAVITVGRNAAEGSGKLMPFIIYTLTNVVLSNVSVSGGT
GGKPVETLSLNFTKIKWELTAQKDDGTKEGTAGTTWDLAANKMTK
NT seq 498 nt   +upstreamnt  +downstreamnt
atggatgcaatcattctcgacctcggcggcgacatcaagggcgacagcctgctggagggt
ttcacggacaagatcgaggtcatgtcctacagccacaacgtggcgatgcaagtcaccaac
gacgtcagcaactcggagcgcacctccggccgaccccacatcggcgagttcaccctgacc
aaattcgtcgacagctccacccccaccctcaatgagtattgctgcgccggcaagccgatc
ccgcaagccgtcatcaccgttggccgcaatgccgccgagggcagcggcaaactcatgccg
ttcatcatctacaccctgaccaacgtcgtgctgtccaacgtcagtgtcagcggcggcacc
ggcggcaaaccggtggaaaccctgtcgctgaacttcaccaagatcaaatgggagctcacc
gcgcagaaagacgacggcaccaaggaaggcacggcgggcacgacctgggacctggccgcc
aacaaaatgaccaagtag

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