Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4619
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Entry
PSEBR_a4619 CDS
T01472
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00470
D-Amino acid metabolism
pba00550
Peptidoglycan biosynthesis
pba01100
Metabolic pathways
pba01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSEBR_a4619
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSEBR_a4619
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PSEBR_a4619
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a4619
Enzymes [BR:
pba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PSEBR_a4619
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Precursor biosynthesis
Amino acid ligase
PSEBR_a4619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATP-grasp_5
RimK
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AEA71035
UniProt:
F2K5A0
LinkDB
All DBs
Position
complement(5620025..5620990)
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AA seq
321 aa
AA seq
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MTAAYANLVSTLDPKAFGRVAVLFGGKSAEREVSLKSGNAVLQALQSAGVDAFGIDVGDD
FLQRLLSEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLASEADCISAATELGFPLIVKPAHEGSSIGMAKVNSLPELTAAWKDASS
YDSQVLVEQWITGPEFTIATLRDQVLPPIALGTPHTFYDYDAKYVANDTQYRIPCGLDAA
KEKELMDLTAKACEALGIAGWGRADVMQDADGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVVSILAASVGHQEPRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcctacgccaacctggtctcgacccttgatccgaaagccttcggccgcgtt
gccgtgctgttcggcggcaagagcgccgagcgcgaggtgtccctcaagtccggcaatgcc
gtgctgcaagccctgcaaagcgccggtgtcgacgcattcggcatcgacgtgggcgacgac
ttcctgcagcgcctgctgagcgaaaagatcgaccgcgcattcatcatccttcatggtcgc
ggtggtgaagacggcagcatgcaaggtctgctcgaatgcctgggcattccctacaccggc
agcggcatcctggcttccgccctggcgatggacaagctgcgcaccaagcaggtctggcac
agtctcggcattccgacgccgcgtcacgccgtgctggcatccgaggccgattgtatttcg
gcggccacggaactgggcttccctttgatcgtcaaaccggcccatgaaggttcaagtatc
ggcatggcgaaagtgaattcgctgcctgagttgaccgcggcatggaaagacgccagttcc
tacgattcgcaagtgttggtcgaacaatggatcaccggtcccgagttcaccatcgccacc
ctgcgtgaccaggtattgcctccgattgcgctgggcacgccccacacgttctatgactac
gacgccaagtacgtcgccaacgatacccagtaccgcattccctgcgggctggacgccgcc
aaggaaaaagaactgatggacctcacggccaaggcctgtgaggcgctgggtatcgccggt
tggggcagggcagacgtgatgcaggacgccgatgggcagttctggttcctggaagtcaac
accgcgcctggcatgaccgaccacagcctggtgccaatggcggcgcgcgccgccggtctg
gatttccagcaactggtggtgtcgatcctggccgccagtgtcggccatcaagagccaaga
ggttaa
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