Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5526
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Entry
PSEBR_a5526 CDS
T01472
Name
(GenBank) catabolite repression control protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSEBR_a5526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a5526
Enzymes [BR:
pba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PSEBR_a5526
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PSEBR_a5526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AEA72053
UniProt:
F2K6X6
LinkDB
All DBs
Position
6664386..6665165
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AA seq
259 aa
AA seq
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MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcacagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatgcagccttccaactggatggttacttcctttatgcctgcgatgcc
gaagtccccgcccagggtggcgtggctttgtactcgcggctgcagccgaaggctgtcatc
aacggtctcggtttcgagacggcggaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttactgctcccttcggggcagaacggcgatgaagatttgaat
cagaaattcaagttgatggacgacttcgcccgttatctggataaacagcggcgcaaacgt
cgcgagtacatctattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccaacaatctcctggcttcctggcgccggaacgggcctggatggacgag
atcattggcaacatgggttatgtcgacgccctgcgtgaagtcagccgtgaaggcgaccag
tacagctggtggcctgacaacgaacaggccgagatgctcaaccttggctggcgcttcgac
taccagctgctgacgcctgggctgcgccgcttcgtacgcagcgcccgcctgccgcgccag
ccacggttctcgcagcatgcgccgctgatcgtggattacgactggacgctgactatctaa
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