Paenibacillus barcinonensis: HUB98_08175
Help
Entry
HUB98_08175 CDS
T06922
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pbac
Paenibacillus barcinonensis
Pathway
pbac00300
Lysine biosynthesis
pbac00550
Peptidoglycan biosynthesis
pbac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUB98_08175
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUB98_08175
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbac01011
]
HUB98_08175
Enzymes [BR:
pbac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HUB98_08175
Peptidoglycan biosynthesis and degradation proteins [BR:
pbac01011
]
Precursor biosynthesis
Amino acid ligase
HUB98_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
RraA-like
LpxD
DUF1611
Motif
Other DBs
NCBI-ProteinID:
QKS60031
LinkDB
All DBs
Position
complement(1740950..1742437)
Genome browser
AA seq
495 aa
AA seq
DB search
MLLNQFQSQLTTARLVGDSNIECHNLQTDSRQVQPGDLFICLPGHTVDGHDYAAKAVQAG
ASALVVERELDLAVPQLIVNDSRFAMAVLSDFFFDSPSRKMKMIGVTGTNGKTTTTYLIE
KIMSDYGQKTGLIGTIQMRYDGRTYPMSGTTPEALDLQRSLHDMVQAGTDCCVMEVSSHA
LEQGRVKGTDFRTAVFTNLTQDHLDYHHSMEEYRGAKGLFFARMGNTYADEASLRKYAVI
NADDPAAAYFISVTAAEVITYGMGEKADVRASEISITAQGTSFHVDTFAGSADIQLRMVG
KFNVYNAMAAISAALVEGVPLEEIKRSLETVPGVDGRVEAVDEGQPYAVIVDYAHTPDGL
ENVLRTVKEFAEGRVICVFGCGGDRDRTKRPLMGKIAAKYSDFVLVTSDNPRTENPDLIL
KDIEQGLIEDAVPAERYTLIVDRRLAIHEAIEMASPADVVLIAGKGHETYQIIGTTKTDF
DDRIIAKEAIRGKSN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgcttttaaaccaatttcaatcccaattgacgaccgctcgtctcgtaggcgactccaat
atagaatgtcacaaccttcagacagattcccggcaggttcagccgggggatctgtttatc
tgtcttccgggacatacggtggatggtcatgattatgctgcaaaagcagtgcaagccgga
gcgtcagctcttgtggtggagcgtgaactggatttggctgtgccgcagctgatcgtcaac
gacagtcgttttgcaatggctgttctctcggacttctttttcgactcgccaagccgcaaa
atgaaaatgatcggtgtgacaggcaccaacggcaaaacaacaacaacgtatttaatcgaa
aaaattatgagcgattacggtcagaaaacaggactaatcggcacgattcagatgcgttat
gatgggcgtacatatccgatgtcaggaacaacgccagaagcgcttgatctgcagcgcagt
ctgcatgatatggtacaggctgggacggactgctgcgtgatggaggtgtcatctcatgcg
ctggagcagggacgtgtcaaaggcaccgatttccgtacagcggtattcacaaacttgacg
caggatcatctggactaccatcactcgatggaggagtatcgtggagccaaagggctgttc
tttgcacggatgggtaacacttacgctgatgaagcctcccttcgcaagtatgcggtaatc
aacgcagatgatccggcagccgcatattttatttcagtaacagctgctgaagtgattaca
tatggcatgggggaaaaagcagatgtacgtgcttccgaaatctcgattacagctcaggga
acttcattccatgtagatacatttgcaggcagtgctgacattcagctgcgtatggtaggc
aagtttaatgtgtacaatgccatggctgcgatctcggcggcactggtggaaggagttccg
ctggaagagatcaagcgcagtctggaaactgttccaggcgtggatggcagagtggaggca
gtcgacgaagggcagccttatgcagttatcgtggattacgctcatacaccggatggactg
gaaaatgtactgcgtaccgtcaaagagtttgctgaaggacgagtgatctgtgtgtttggc
tgcggaggtgaccgtgatcgaaccaagcggccgttaatggggaaaattgctgcaaagtac
agtgattttgtactggtaacttctgataatccgcggaccgaaaatccggatctgattctg
aaggacattgagcagggtctgatcgaggatgctgtaccggctgaacggtacacgttgatt
gtggatcgccgtttggcaatccatgaagctattgaaatggcaagcccagccgatgtagta
ttgattgcgggcaagggtcatgaaacgtatcagattatcggcacgaccaagactgatttc
gatgaccggatcatagctaaagaagcgataaggggcaaatccaattga
DBGET
integrated database retrieval system
