Pogonomyrmex barbatus (red harvester ant): 105422510
Help
Entry
105422510 CDS
T04903
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 3 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105422510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105422510
03036 Chromosome and associated proteins [BR:
pbar03036
]
105422510
Transcription factors [BR:
pbar03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
105422510
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105422510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_PNT
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
105422510
NCBI-ProteinID:
XP_011630202
UniProt:
A0A6I9VRG2
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MRRDMPMINAMSARMEEEIVVDDIDENNTVDTQQTDDSTTSVMPLLYIQQNKTRSTQSSN
INQALVSPSPQIAAIINPVNNQIVTGQNKVFIQGPTQVATSQSKQHIVIHRPINTVSTAA
NSQAQKHILLRKSSSTAQILPLNTTQGSQTNAQVGKHTFAYLGTLIKPNKTRESVVIPAG
ALTPTQITKPKLVITPVISQLAQTSTSTTSGSQSQPPKHMANLILPVNIPQQSGTTKPSM
FNLKINNGQLSTESKGTITVLRESKTTNSTTHPPPLHPIAKMSLLNANKGNSNSIDSIKI
TENPDSAVITPIPKKEDSQPEKRKKTISNILRGSTEKRMKKQNIPKSPQDNLADTNYALS
SPESEQDKDKKAQNDDDITLIKVIPSEDKVSKLNTNMDDDIKIEIIKTPNCNVETVLDNK
NETKSNNCDETKDQLNTLNQTNTNFDASKVLDWKDGVGTLPGSNLQFRMNEFGIMEVVDE
DESNKQNKDGIGDKENVCLTQNSSKTSSGIINNTNIEKKVEDRKSRSVSADTVYHCEACG
CYGLAAEFESPISCSPSCTEVIEAKKQPVNRKDKDLKEVRMKKKRKRLLQEPQWSKDMDE
RSDEKTHDKIKLEMDEEKDVLASIDDEIQGDSSESKYPWQRGKLGFSWPKYLEHCKAKAA
PVKLFKDPFPYTKNQFRVGMKLEGIDPEHPSRYCVLTIAEVVGYRMRLHFDGYPENYDFW
VNADSMNIFPVGWAEKNGKKLNPPKGYTSANFNWNAYLKICKASLAAKNLFPNKNILQSV
FPTVFRVGMKLEAVDRKHSSLLCVASIAGLMDSRILVHFDSWDEVYDYWADASSPYIHPV
GWSHHNGRVLMPPNNYKDPKSFTWDAYLRETGSVAAPARAFKQRPPCAFKRGMKLEAVDK
RVPQLIRVATVEDVKDHLLKIKFDGWPDNHAYWVDDDSPDIHPVGWCAKTGHPLEPPLTP
DNLNDRPECGTYGCRGIGHVKGPKFATHNSASGCPYSPQNLNKTGQMPDRLNLAKNQDLN
EAYDFEEEMQEKLKLEKSDRIKIEKSEKPDKSLFSDDMLMIDKEIKQEDGDLSDKNDKSE
NRSENSDKSNKCKNLHSDGQTDDDEVSRKRKKRRPISEEPLFTTVTNVTYGDLHWNTTSY
AANIPVKQLRKELYQSVYNPGYNPLPNAPHIWAKHSNALNRVVSRQTTNPRRWSNEEVIK
FIQSMPNCAEAGNVFRQHSIDGEAFLMLTQEDLVSVLRLRLGPAIKLYNSIVLLRQKAA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtgatatgccgatgataaacgctatgtccgctagaatggaagaagaaatagta
gtagacgacatagatgagaataatacagtggatacacagcagacggatgactcgacaaca
tccgtaatgccactgctatacattcaacaaaataaaactcgttctacacaatcatcaaat
ataaatcaagccctcgtttcacctagtcctcaaatcgctgctattattaatccagttaat
aatcagattgtaactggacaaaataaggtatttatacaaggaccgactcaggtagctaca
tctcaaagtaaacaacacattgtaattcatcgaccaataaataccgtgagcactgcagca
aattcgcaggctcagaaacatattttacttagaaagtcatcatctacagctcagatattg
cctttgaatacaacacaaggaagtcaaaccaatgcgcaagtaggaaagcatacatttgca
tatttgggaacccttattaaacccaacaagacacgagaatctgtcgttatacctgcaggg
gctctaacaccaacacagataaccaaaccgaaattagtaattactcccgtaatatctcaa
ttagcccaaacgtcaacaagtactacaagtggttctcagagtcaacctcctaaacacatg
gcgaatttaatattaccagtaaatataccccagcaaagtggtactacaaaacctagtatg
tttaatctaaaaattaataatggtcaactcagtacagagagtaaaggaaccataacagtg
ttacgtgagtcaaaaacgacaaattcaacgacacatcctccaccattgcatccgatagca
aaaatgagtcttttaaatgcaaataaaggcaattctaattccatagacagtataaaaatt
actgaaaatccagattcggccgttatcacgccaatcccaaagaaagaagacagtcaacca
gagaaacggaaaaaaactattagcaatatattacgaggttccacggaaaaacggatgaag
aagcaaaatattccaaaatctcctcaagataatttggctgatactaattatgcattgagt
agtcctgaatccgaacaagataaggataagaaggctcaaaatgatgatgatattacattg
attaaagttattcctagtgaagataaagtttcaaaactcaatacaaatatggatgacgat
ataaagatagaaataattaaaactccaaactgtaatgtcgaaacagtgctagacaataag
aatgagacaaagagtaataattgtgatgaaacaaaagatcaattgaatactttgaatcag
actaacaccaattttgacgcatctaaagttttagactggaaagatggtgttggtacttta
cctggaagtaatttacagtttcgtatgaatgaattcggtattatggaagtagtcgatgaa
gacgaaagtaataaacagaataaggatggtattggtgacaaagagaatgtatgtttaaca
caaaattcttcaaagactagctcaggaatcattaataatacaaatatagagaaaaaagtt
gaagatagaaaatctagatcggtaagcgcagatacagtatatcattgtgaagcttgtgga
tgttatggattggctgctgaatttgaaagtccaatatcatgtagtccgtcttgcacagaa
gtaatagaagctaaaaaacagcctgtaaatcgaaaagacaaagatctaaaagaagtacgt
atgaaaaagaaacgcaaaagattattacaagaaccacaatggtcaaaggacatggatgaa
agatctgatgaaaagacacatgataagataaaattggaaatggatgaggaaaaagatgtg
ttagcaagtatagatgatgaaattcaaggagattcatcagaatccaagtacccttggcaa
agaggaaaattgggtttttcgtggccaaagtatcttgaacattgtaaagcaaaagctgcg
cctgttaaattattcaaagatccttttccctacactaaaaatcaatttagagttggaatg
aaattggaaggtatagatccagaacatccttctcggtattgtgttctaactattgccgag
gttgtaggttatcgaatgcgtttgcatttcgacggttatccagaaaattatgatttctgg
gtaaacgcagatagcatgaatatatttcctgtcggttgggctgagaaaaacggcaagaaa
ttgaatccaccaaagggttacacatctgcaaactttaattggaatgcatatctaaaaatt
tgtaaagcatctttagcagcaaaaaatttatttccgaataaaaatatacttcaaagtgtc
tttcccacggtctttcgagtgggcatgaaattagaagcagtagataggaagcattcttca
ttactttgtgtcgccagcattgcaggtttaatggactctcgaatattagtccattttgat
tcttgggacgaggtatatgattattgggccgacgcgagttctccatatattcatcctgta
ggatggtctcatcataatgggcgtgttttgatgcctccaaataattataaagatcctaaa
tctttcacttgggatgcatatttgagagaaactggctcagtggctgctccagctagagcg
tttaagcaacgaccaccttgtgcgttcaaacgtggtatgaaactggaagctgtggataag
cgggtcccacagttaatcagagtagcaacagtcgaggatgtgaaagatcacctattgaaa
ataaaattcgatggctggcctgacaatcatgcctactgggttgatgatgattcacctgat
attcatccagtaggttggtgtgcgaaaactggtcatccattggaaccgccacttactccc
gataatctaaatgatcgaccagaatgcggtacatatggctgtcgaggtataggacatgta
aaaggacctaagtttgcaacgcataattcagcatctggttgtccatattctcctcaaaat
ttaaataaaacgggacaaatgcctgatagactcaacttagcaaaaaatcaggatttaaac
gaagcctatgatttcgaggaagagatgcaagaaaagttaaaattggagaaatctgataga
ataaagatagaaaagtctgaaaagcctgataaatctttgttctcagatgatatgttgatg
atcgacaaggagattaaacaggaagatggagatttatctgataagaatgataaatctgaa
aataggtcggaaaattcagacaaatcgaacaaatgcaagaatctgcacagcgacggacaa
acagatgatgatgaagtttcgagaaaacggaaaaaaagacgcccaatttcggaggaacct
ttatttactaccgttactaacgttacgtatggtgatctacattggaatactacctcatac
gctgcaaatataccagttaagcaattacgtaaagaattgtatcagtctgtatataatccg
ggatataatcctttgccgaatgcaccacatatatgggcgaaacatagtaatgccttaaac
agagtagtatcgagacaaacgaccaatccacgaagatggtctaatgaagaagtcattaaa
tttatacaaagtatgcctaattgtgcagaagctggtaatgtttttaggcaacatagtatt
gatggcgaagcatttttaatgttgacacaagaagatttggtatcagtactccgtctgcga
cttgggcctgcaattaagttatataatagtatagttttattacgtcaaaaagcagcatga
DBGET
integrated database retrieval system
