Pogonomyrmex barbatus (red harvester ant): 105422752
Help
Entry
105422752 CDS
T04903
Name
(RefSeq) ATP-dependent helicase brm
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105422752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105422752
03036 Chromosome and associated proteins [BR:
pbar03036
]
105422752
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105422752
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105422752
Chromatin remodeling factors
BAF complex
105422752
PBAF complex
105422752
GBAF(ncBAF) complex
105422752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
105422752
NCBI-ProteinID:
XP_011630548
UniProt:
A0A6I9VPE9
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNAQGSPMGPPQQHHPHSPTQGYQSGPPIPQ
GGPPMSQGGPPQQPPPQQQSYPPHPQQMPPNMGPQNQGPGGPVGQVPTSQQGPGGPMIPG
QMGPNGPQSGSHMMQSGPNQMGSNAPGQMGPGGPGQMGPGGPGQMGPGGPGQIGPGQMAP
SHMVQGGPPGGSHVGPNGPGQMGPGSGPVSGPQMGTGNSQNSQMISGGPGPGHMGGPPSH
MNASGPPGPGHITPGGPPGPGHMGNAGPPVSGHIGASGTSGHINASGPPGSAHMNASGPP
GSGGHMNSGPPIPTHMNASGPPVSSHMNASGPGSHMGPGAPGQMSASGPAGHNMGPGGPN
QMGPGGPNQMMTNSQTQMGPSGPMGPVGPTGQIGPNGPGQMGHNGPSQMSMGGPPGQMNM
NAPGGQMGPGGPGNQMGPAGAGNQMGPGAPGNQMGPSGPGGQMGPGSGPVGQLGPNSLGQ
MGPGSAPGNVPMTTSSAPVVSIGPNGPTGIGIVSGLGGQMTSSSGPGGQMGAAGPGSSSG
GQMGPGNGPGVQMNAGSGPGGQMVSGGMPGGPGMGPGSGQMGHSGSGPGGQMGPGGGPGG
QIGPGSSQMGPGGQIPSGPGQMMQGGPGSQMGPNAPSNQMGPGGPNSQMGSCAPNNQISH
TNATGQMGSNGPNIQPPTTQIGPGSQNQGQVSGSTAPIGSGTPVNQMSQTGSGQIGPTGP
TGPPGSGQENLNALQKAIDSMEEKGLQEDPRYSQLLALRARQGSGMGDKQAFNTQQLQQL
RAQIMAYRLLARNQPVPQQVALAAQGGTPPPPGMGQRPIDPSQGPATTAGSQIPGPNVIG
PAGAPRPGCQTPQQQQQQPQSGAKANRVTSVAKPVGLDPLLILQERENRVAARISLRMEQ
LSNLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKR
QGLREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAV
LNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL
TEMVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAGEDGAVSDDTRIGVIETATGRTLTGD
EAPLMSQLSAFLEAHPGWEPIESDSEEDEEDDEEENGESEDKSDSKDKVMGDSEEEKVKK
TIHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNN
LNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVV
SYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCK
LTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE
KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQ
SKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVIT
GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTK
AEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH
RIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSIL
HQDDAEDEEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAE
LPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEE
EEDDKKKKKTRKRKKKGEEDDEPMPKKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGR
LLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIY
NEEASLIHEDSIVLQSVFTNARQRLEEEGNNSDGDDKDGEDGSDADSSVRMKIKLKGRKG
EGRGGRRKRVTKKYISDDDDDADDN
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccttcgccacaatcttcacctatgccacctccgcaagctcctagccctatg
ggccctccacagcaggcgccatctccatctaatgcgcaaggcagtccaatgggaccaccg
cagcagcatcatcctcatagtccgacgcaaggttatcagagtggtccaccaataccacag
ggaggaccacccatgtcacaaggaggaccaccacaacaacctcctccccaacaacaaagc
tatccacctcatccacagcaaatgccacctaatatgggtccacagaatcaaggtccaggc
ggtccagttgggcaggtacctacttctcagcaaggtcctggaggaccaatgatacctgga
caaatgggtccgaatggaccacaaagtggttctcatatgatgcaaagtgggcccaatcag
atgggatctaatgcacctggccaaatgggacctggtggtcctggccaaatgggtcctggc
ggacctggacagatgggaccaggaggtccaggacagatcggtcccggacaaatggcgccg
tctcatatggtacaaggaggtcctcctggtggatctcatgtaggtccaaatgggcctggt
caaatgggaccaggtagcggacctgtatcaggacctcagatgggtactggaaattctcaa
aattcgcaaatgatttctggaggacccggcccggggcacatgggcggacctccaagtcat
atgaatgcaagtggcccaccaggaccaggtcacataactcccggtggtcctcccggacca
ggacatatgggtaatgcaggacctccagtatcaggacacataggcgctagcggaacatca
ggacatataaacgcaagcggtcctcctggatcagctcacatgaacgctagtgggccgcct
ggatcaggtggtcatatgaacagcgggcctccaattccaacacatatgaacgcaagtggt
ccgccagtatcttcacatatgaatgctagtggtccgggaagtcatatgggtcctggtgca
cctggtcaaatgtctgcaagtggtcctgcaggtcacaatatgggtcctggtggtccaaat
caaatgggtccaggtggtccgaatcaaatgatgacgaatagtcaaacgcagatgggacct
agtggcccaatgggtcctgttggaccaacagggcagattggaccaaatggacctgggcaa
atgggtcataatgggccgtcacagatgagtatgggtggtccacccggacaaatgaatatg
aatgcaccaggcggacaaatgggtcctggtgggccgggtaatcaaatgggacctgcaggg
gcaggtaatcaaatgggaccaggcgcaccaggcaaccaaatgggaccttctggtccaggt
ggacaaatgggcccaggtagcggtcccgtaggacaattaggtccgaatagtcttggtcaa
atgggtcctggaagtgctccaggaaatgtaccaatgacaacaagtagtgcacctgttgtt
tctatagggcctaatggaccaactggaataggtatagttagtggacttggtggacaaatg
acctctagcagcggtccaggaggacagatgggtgcagcgggtcctggaagcagttctggt
ggtcaaatgggcccgggaaacggtcctggggtgcaaatgaatgccggtagtggacctggt
ggtcaaatggtatcaggaggcatgcctggtggaccaggtatgggaccaggtagtggacaa
atgggacatagtggtagtggacctggtggccaaatgggaccaggaggcggacctggtgga
caaataggaccgggaagtagtcaaatgggaccaggaggacaaattccctctggtccagga
caaatgatgcaaggaggcccgggttctcaaatgggcccgaacgctccgagcaatcaaatg
ggacctggtggtccgaatagtcaaatggggtcatgtgctcccaataatcaaattagccat
acaaacgcgactggacaaatgggttctaatggacctaatattcagcctcctactactcaa
atagggcctggtagtcaaaatcaaggtcaagtttctggtagcacagcaccaataggatca
ggtactccagtaaatcaaatgagtcaaactggaagtggacaaattggacctaccggacct
acaggaccacccggatcgggacaagagaatttaaatgcgcttcaaaaagcgatagattct
atggaagagaaaggattgcaagaagatccacgatactcacaattgttagctttgagagct
cgtcaaggtagtggcatgggcgataagcaagctttcaatacacaacagttgcagcaatta
cgagctcagataatggcatacagattactagcaagaaatcagccagtacctcaacaagtg
gcattagctgcacagggtggcacgcctcctcctccagggatgggtcaacgacccatagat
ccgtctcaaggccctgctaccacagctgggtcacaaataccaggtccgaatgttattggt
cccgcaggtgctcctagaccaggctgtcagacaccgcaacaacaacagcaacaacctcag
tctggtgctaaagctaatagagtaacaagtgtagcgaaacccgttggattagatccatta
ttaatattgcaggagcgagaaaatagagttgcagctcgtatatcgcttagaatggaacaa
cttagtaatttaccgacaaatatgccagaagatcttcgtatacaagctcagatcgaattg
cgtatgctgagagtattaaacttccagagacaattaagatccgagattatagcatgtacc
cggaaggatactactttagaaactgctgtgaatgtgaaagcttataaacgtacgaaacga
caaggattacgtgaagctagagctactgaaaaattagaaaagcaacagaaattagaagca
gaacgtaaacgaagacagaaacatcaagaatttcttagttctgtattacaacatggcaaa
gatttcaaagaatttcatcgtaacaatgttgctaaattagctagacttaataaagcggtg
cttaactatcatgcaaacgctgaacgggagcagaagaaagaacaagagcgtattgagaaa
gaacgtatgcgtcgtcttatggcggaagatgaagaaggatatagaaaactaatcgatcaa
aagaaagataagcgtttagcattcttgttatcccaaactgatgaatatataagcaatctc
acggaaatggttaagcaacataagatagagcaaaagagaaagcaagtagaagaacaaaag
cgtaagaagaaaaagaagaaattgcaagatggtgaaaatgctggtgaagatggtgcagtc
agtgacgatactcgtattggtgtaatagaaactgccactggtcgcacattaaccggtgat
gaagcaccattgatgagtcagttgtcagcatttttagaagctcatcccgggtgggagcca
attgagtcagatagcgaagaagatgaagaggatgatgaagaagaaaatggagaaagtgaa
gataaatctgatagcaaagataaagtaatgggcgattctgaagaagagaaagtcaagaaa
actatacataaagcaaaagtggaagatgatgaatataaaactgaagaacagacatactac
agcattgctcatactgttcatgaagtggttactgaacaagcaagtatcatggtgaatgga
aagctaaaagaatatcaaattaagggtttagaatggttagtgtctttgtttaacaacaac
ctgaacggtattttggcagatgaaatgggtctcggtaaaacaattcagaccattgctctg
gtaacatatttaatggaaaagaagaaagtcaatggtccttttcttattatcgttccatta
tcgacgttatctaattgggttcttgaatttgaaaaatgggcaccgagtgttgttgtggta
tcatacaaaggttctccagctggcagaagagcgatacaatctcagatgcgagctacaaag
ttcaatgttcttttaacaacttacgaatatgtcattaaagacaaaggtgtattagccaaa
ttgcagtggaaatatatgattattgacgaaggacacagaatgaaaaatcatcattgcaaa
cttacccaagtgcttaatacacattatttggctcctcatcggttattgttaactggtacg
ccgttgcaaaataaattgccagaactgtgggctcttctgaatttcttgttgccttcaatc
tttaaatcctgcagtacatttgaacagtggtttaatgctcctttcgccactactggcgag
aaggtggagctaaatgaagaagaaactattttgattattcgtcgtttgcacaaagttttg
cggcctttcttattgagacgcttgaaaaaagaagtagaatcacaattacctgataaagtg
gaatatatcattaaatgtgatatgtctggcctacaaaaagttctttataagcatatgcaa
agcaaaggtgtattactaaccgatggatcagaaaaaggaaaacaagggaaaggcggtgcc
aaagctcttatgaatacaattgtacagctgagaaaactatgtaatcatccatttatgttt
caagctatagaagagaaatactgtgaacatgtaggcacacaaggttccggtgttattact
ggccccgatttatatcgtgcatctggaaaattcgaacttctcgatcgtattcttcccaaa
ttgaaggctacaaatcacagagtattattattttgtcaaatgactcaattaatgacaatt
atggaagattatttaagttggcgtggattcatgtatctaagattggatggtacaacaaaa
gcagaagacagaggagacctgttaaagaaatttaatgatcctggctcggaatatttcctc
tttttgctatccacacgtgcaggtggtcttggtttaaatcttcaagctgctgatacagtt
attatctttgactctgattggaatcctcatcaggatttgcaagctcaagacagggcacac
agaatcggacagaaaaacgaagtacgagtactccgattaatgactgtgaattccgttgaa
gagcgaatattagcagcagctagatataagttaaatatggacgaaaaagttattcaagct
ggtatgtttgatcagaagtccactggttctgagagacaacaatttcttcagagtatcttg
catcaggatgatgccgaagatgaagaagagaatgaagtgcccgatgatgagactgtaaat
caaatgattgctagaacagaaggtgaatttgaaatattccagaaattagatttagagcga
cgacgtgaggaagccaaattgggtccaaatcgtaaatcgcgtctattagaagaagctgaa
ttgcctgactggttagtaaaagatgatgatgaagtagaaagatggacctacgaagaagat
gaagatagattccttggaagaggttcaagacaacgtaaagaagttgattatacagatagt
ttaactgaaaaggagtggttaaaggcgattgacgatgacggcgcagagtatgaagaggaa
gaagaagatgataagaagaagaaaaagacacggaaacgaaagaagaaaggcgaagaggac
gacgagcctatgccgaagaaacgaagaggcgccggatctttagttgatcctaaaatgaaa
cgggctatgaagaaactaataacgttagttgttaattatactgatagtagtgatggccga
ttattgagtgagccatttatgaaattaccttcacgaagagaattaccagattattatgag
atcattaagaaaccattgactattaataaattattacaaaaaatcgaagaaggcaaatac
gctgatttagacgaacttgaaaaagattttatgcaactttgtaagaatgctcaaatttat
aatgaagaagcatcccttattcatgaagactcgatagtgttacaatccgtttttacgaat
gcgcgtcagcgtcttgaagaggaaggtaataattctgatggagatgataaagatggcgaa
gatggatcagatgcagattctagcgtaagaatgaaaattaaattgaaaggaagaaagggg
gagggaagaggcggtcgtaggaagagagttactaaaaaatatatatctgatgatgatgat
gatgccgacgataattaa
DBGET
integrated database retrieval system
