Pogonomyrmex barbatus (red harvester ant): 105424625
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Entry
105424625 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: dosage compensation regulator-like
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbar03041
]
105424625
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105424625
Spliceosome [BR:
pbar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105424625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
nSTAND3
dsrm
Dicer_dimer
AAA_19
AAA_14
HA2_C
ATPase
Motif
Other DBs
NCBI-GeneID:
105424625
NCBI-ProteinID:
XP_011633247
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MAEMTLYIKQLGRSITGRETGSNKQTASKSCALSIVRQLYHLGVIEAFSGTXKKNKDAEQ
MKPYPVKISPELENQILDVLTSLEIKPVDINQLPSVPKGENDTSTTGVSLLTNQVLDDFI
SSVPQPAGVVSWSPPQPNWNPWAGCNIDEGPLATISLDQLSEDLMNEQREKLQQDSSLQA
SMKERSTLPVFTKXNEIMNAVNENPIIIIRGNTGCGKTTQVCQFILDDYIASGQGAYCSI
VVTQPRRISAVSVADRVAIERCETLGQSIGYSVRFESCLPRPYASIMFCTVGVLLRKLEG
GLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLYPDLRIILMSATIDTTLFSEYFNNCPV
VEIPGRSFPVQQYFLEDCIELTNFVPPTISGKRKSKDSDELPITDGEPEENLNKVISNNY
SVQTKNSMAQLTEKEISFELIEALLMYIKQQEIPGAVLIFLPGWNLIFALMKHLQQHSVF
GKSSYLIIPLHSQLPREDQRKVFDPVPPYVTKIILSTNIAETSITINDVVYVIDSCKAKM
KLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKMEEHMTPEMFRT
PLHELALSIKLLRLGNIGQFLSKAIEPPPIDAVIEAEVVLREMKCLDKNDELTPLGKILA
RLPIEPRLGKMMILGCMFRVGDALSTMAANSTTFPEVYNMGPDMRRLTNQQKWFAGARYS
DHVAMFHAFQMWEEARANGEWAEQSFCESKSLSLPTLRITSEAKNQLQALLQSAGFPEET
LCPVPLNYQAGADPRLDTITALLCMGLYPNVCYHKEKRKVLTTESKAALIHKTSVNCSNF
EQNFPFPFFVFGEKIRTRAVSCKQMTMVSPIHLLLFGSRKVEYVDSVIRLDNWINLDMNP
QHAANIVALRPALESLVIRASKDPETILELSSIEEKVLSVIKALCSMNACRHELEQVSNS
GFQLRTRGYASNYRFNYTPPPKMMRGNGYRGPSNESYGGSSFSGNYGGGYRGNYNNRDYG
TGNSRGRNGNWNNGGGFRGRY
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatgactctttatattaagcaacttggacgaagcataactggccgcgaaact
ggatcgaacaaacaaacggcttcaaaaagttgtgctttatctatcgttcgccaactgtat
catttaggtgttattgaagcatttagtggtacanttaaaaaaaataaggatgctgaacaa
atgaagccttatcctgttaaaatttcaccagaattggaaaatcagattctcgatgtttta
acgagtttggaaataaaaccagttgatattaatcagttgccctctgtaccaaaaggagaa
aatgacacttcaactactggtgtatctttattgacgaatcaagttttggatgattttata
tcttcagtgccgcaacccgccggtgttgtaagctggtcaccacctcaaccaaattggaat
ccatgggcaggatgtaacatagatgagggaccactggcgacaatatctttggatcaattg
tcggaagatttaatgaatgaacagcgtgaaaagttgcaacaagattccagtttacaggca
agcatgaaggaaagatcaactttgcctgttttcaccaaanaaaatgagattatgaacgcg
gttaatgaaaatccaatcattattatacgtggaaacacgggatgcggtaagactacacaa
gtttgtcagtttattctggatgattatatcgcgtccggccaaggtgcgtattgcagcata
gttgtgactcaacccagaagaatctcagctgtatctgtagctgaccgagtcgccatcgaa
agatgtgaaactctaggccaatcaatcggatattctgtgagatttgaatcctgcttacca
agaccatatgctagtataatgttttgtactgtgggagtactcttgaggaaactagagggc
ggtctcagaggtgtgtcacacgttatcgtcgatgagattcacgagcgagacgtcaattcg
gattttattatggtggtacttcgagacatgatccatctctatcctgatcttagaattatt
ctcatgtcagctacaattgatacaacgctgttcagcgagtacttcaataattgccctgta
gtagaaattcccggcagatcctttcccgttcagcaatatttcttagaggactgtatagaa
ctgacgaattttgttccacccacaatatctgggaaacgtaaatctaaggattcagatgag
ttgcccataacagacggcgaaccagaagaaaatctgaataaagtcatcagtaataattat
tctgtgcaaacaaagaactctatggcacaattgacagagaaagagataagttttgagttg
atagaggcgctactcatgtatattaaacaacaggagatcccaggtgctgtattgattttt
ctccctggctggaacttgatatttgcgttgatgaaacatcttcagcaacattctgttttt
ggcaaatcgtcttatcttattattccactacattcgcaattaccaagggaagatcaacgc
aaagtctttgatcccgttccaccttatgtaacgaagattatcttgtctacgaatatcgca
gaaacttcaatcacgatcaacgatgtcgtctacgttatagattcttgcaaggccaagatg
aaattatttacctcgcataataatatgaccaattacgcaactgtttgggctagtaaaacg
aatttggaacaacgcaagggtagagcgggtcgcgttcgtcccggtttttgttttcatcta
tgttcaaaagcccgatttaacaagatggaagaacatatgacaccggaaatgtttagaaca
cctttacatgaattggcactgagcatcaaattgttaagattaggtaatattggacagttc
ttatcaaaggcaatcgaaccacctcccatcgatgctgtaattgaagcagaagttgtatta
agagaaatgaaatgtttggacaaaaacgatgaattgacgcctcttggcaagatccttgcg
cgtttacccatagaaccacggctaggaaaaatgatgatcctgggatgtatgtttcgcgtg
ggtgatgcgctctcgacaatggccgcaaacagtaccacctttcccgaggtgtataacatg
ggtccagacatgagaagactgacgaatcagcaaaaatggtttgctggtgcgagatacagt
gatcatgttgcgatgttccacgcttttcaaatgtgggaagaagcaagagccaacggcgaa
tgggcggaacagtcattttgtgaatcaaaaagtctaagtttgccaactttacgaataacc
tcagaagctaagaatcaactgcaagcattgctgcaaagtgccggttttcctgaagagact
ttatgtccagtcccattgaattatcaagctggtgctgatccgcgtcttgatactatcacc
gcgttattatgcatgggcctgtatcctaatgtttgctatcataaggaaaaacgaaaggtt
cttaccacagaatcaaaagctgcactgattcacaagacgtctgtgaactgcagcaacttt
gagcaaaactttccgtttccattcttcgtctttggtgagaagattcgcactagagctgta
tcttgcaagcaaatgactatggtgtcgcctatacatttattgctgttcggctcgcggaaa
gtggaatatgtggatagtgtaattcgattggataactggatcaatttggatatgaatcca
caacatgcagcgaatatagttgctctacgacccgctttggagagtctcgtaattcgagca
tccaaagatccagaaacaatcctagagttgagttcaatcgaagaaaaggtattgagtgta
atcaaagcgttatgtagtatgaatgcttgtcgtcatgaactggagcaagtatccaatagt
ggtttccaattgcgaacgagaggatatgcatccaactatcgtttcaattatactcctcct
ccaaaaatgatgcgtggaaatggttatcgcggtccctctaacgaatcttatggaggtagt
agttttagtggtaattacggcggtggatacagaggaaattacaacaacagagattatgga
acgggcaactcgcgtggtcgaaatggaaattggaataacggtggcggattccgtggacgt
tattaa
DBGET
integrated database retrieval system
