Pogonomyrmex barbatus (red harvester ant): 105427130
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Entry
105427130 CDS
T04903
Name
(RefSeq) cadherin-87A
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
105427130
NCBI-ProteinID:
XP_011637051
UniProt:
A0A6I9W974
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All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
LPRKRAVLLAICLLATCTAGNNVNEPPILEAGGYPTGLPLSESTKVGTEVFVLKGHDPEG
SPVKYGIQLTDHFVVNPRTGVITLAKPLNREENDTIRFRVTLEDEVPAGQQPNIVGVDAY
VIVLDENDNPPHFLGVPYEAVAEEDTPVGSTILPGIRVVDPDLLGDIIDLTCVPQPQFLD
ACEKFGIVNVERSQNTYVGALVLRQPLDYRERPFYQLLLRASDGLNNGTTGVEIKVADIQ
NSPPEFLDSLTGVVREDDPIGTLVMTVKARDGDRGMPRKMIYELVTNPFDYFLLDDDTGE
LRTAKPLDREALENSTGVLTLIVKARELIDGIPGNDKLTVSTAEATVTIKDVNDEPPTFN
RREYNIEIPENVPDGTPLPHLDMTVKDPDVGLNSVFSLRLDDITGAFTVEPVLATGSTSV
NIRVTNGSLDYENPNQRKFIILVVAEEVHTNPKLSSTATVTISITDANDNAPSFGSPTYT
ATVSETAAPGSPIITITAKDRDSGRFGTAGIVYQLLGQGAEHFAINKKTGTIAVEACPTP
GTSPCLDYEQQTEYFLTYKATDDNGEGQTTSVSLRISLVDANDSPPRFLQDKYRAVVDEG
AEKFEPELKVQARDKDKTSKITYALVGGNELGLFAVDPDTGEITIKSPVDMTNATHDWID
LTIQASDGKFVDSALVNITVRDVNNNAPVFPHDIYTASIAEISPIGTVVGEVTATDADSG
VNAELVYRIQKGAFDDFAINETTGVVTVSRKLDYDEKNTYHVEVIALDKGTPSLTGTTTL
MIEVENSNDKAPYFTPETQRAEVTEDTPIGTVFTTLKATDPDSTNLEALNFAISEPITAI
DRNGQRVNDSKSFKDFFAVDRATGQVSVVRALDRDIAATVSVTIVVSDTTAPTLQQGRGK
LVVTIIDVNHMAPEFLKPWTRENPRYLIEMQEEQPTGAVVGAFTATDADSNIAGYAIDPP
SPYFNIDNITGIVRTSQVIDYEETKQLEFMVVAYDSGVPQLSATARVIVTVINVNDQNPK
FEKELYNASVKENSPPGTRVIVVKATDGDEGSFGDVSYSLIGEHAADFNIGHETGEITVG
GATVLDREMTPEITITVMASDGAHVNSRRSTTVPVVVKLIDENDNRPIFSQHSYRASVAE
NLSVNPPAPILQVRAVDQDDGTNGEVWYTIINGNENESFSLNRETGILYPAAALLGRAGS
YRIEVEARDGAGNGPHSDRCYVDIRVTPVNQHKPQFVMPELTNATVEVPENAGVPNYLIL
TVKAIDRDPGENGRVSYHLKVSNRNVQETEEFSIDQETGELRSKIILDREIKSKFELVLV
AADHGSPTAYETLRLLTVQLVDTNDNVPQFYEEYNFHVSENRPKDYLIGKVTAEDKDEGR
HAKVYYYIEAGNEGYAFYMDKSDGSIYANKSFDRETRDKYILSILASNDPDLYISPAQSG
RPLTHNPEHGHVNVTITVLDENDNPPIFERNDYYAGVNSMANINDFVTKVTASDLDVGDN
GTLHYYVASANLYKYGSEKPSGSIVPSPFNVTQDGKLVTSGYMAEYNQDRFIVEVIAKET
AIPERYAMTKVHVWVFEPSQLIRVILSRPPEEVNSERDEIVSELSNATQSRVVVDDIRYH
VDASGHIRREWCDMYLHVVEPKTQTIAPIPHVLKVIDAKYDFLKHYYAGFAIENVVPAYA
GVQEEPFDPALAALIALLVVLLVGAVTVTVVCCCLRHWVITVPNDIRKKDGLIKKQIIDE
LNTTENPLWIEQKLKLYEEQELTMQVFSEPEGGLGGERRGSGVSVGMGDTSQDNTYATIQ
HPLPANRHRPTTPDYTTLPGNHNLYESAMGFQGSTFQPSPNVMPQLTVDRDGQPQFVSGL
I
NT seq
5587 nt
NT seq
+upstream
nt +downstream
nt
gttgcccaggaagcgagcggttctgctggcgatttgtcttttggccacttgcacggcggg
taacaacgtgaacgagccacctatcctggaggccgggggatatcccacgggcttgccact
ctcagaatcgaccaaggtcgggacggaagtgttcgtcctgaagggccacgatcccgaagg
atcgccggtgaaatatggcatacaactcacggaccatttcgtcgtcaacccgcgcaccgg
tgtcatcactctggcgaagccgctcaatcgcgaggagaacgacacgatacgcttccgcgt
gactctggaggacgaggttcccgcggggcagcagccaaacatcgttggcgtcgacgctta
cgtgatcgtgctggacgagaacgataatccgccgcacttcctgggtgtgccgtacgaggc
ggtcgccgaggaagacaccccggtcggctccaccatactgccgggtatcagggtcgtgga
ccctgacctgctgggcgacatcatagatctaacgtgtgtcccgcagccacagtttctgga
tgcatgcgagaagttcggcatagtcaatgtcgagaggagccagaacacgtacgtgggcgc
cctggtgctgcggcaaccactcgactaccgggagaggcctttctatcagctactactgcg
agcgagcgacggtctgaacaatggaaccactggcgtcgagatcaaggtggcggacattca
gaacagtccgccggaatttctggactcgctaacaggtgtagtgcgcgaggacgatcccat
cgggactctcgtgatgaccgtaaaggcccgagacggcgacagaggcatgccgcggaagat
gatctacgaattggtcactaatccgttcgattatttcctgctggacgacgacacgggcga
gctgaggacagcgaagccgctggacagagaggcgctggagaactcgaccggcgtgctcac
gctgatcgtgaaggcccgcgagctgatcgacggcatacccggcaacgacaaattgacggt
atcgacggccgaggcgaccgtgacgattaaggacgtcaacgacgagccgcccacgttcaa
tcggcgcgagtacaacatcgaaatcccggagaacgtgccggacggcacgccattgccgca
cctggacatgacggtgaaagatccggatgtgggcttaaactccgtgttctccctgcgact
ggacgacataacgggtgcgttcaccgtggagcccgtgttggccaccggcagcacgtccgt
gaacatccgtgttacgaacggctcgctcgattacgaaaatcctaatcagcggaaattcat
tatcctggtcgtcgcggaggaggtccacacaaacccgaagctatcgtccacggcgacggt
aacaatctccatcacggatgcaaacgacaatgcgccttccttcgggagtcccacgtacac
ggctacggtgtccgagacggcagccccagggagcccaattataacgattacagcgaagga
tcgcgacagcggacgcttcggcactgccggcatagtttaccaattactcggccagggcgc
ggagcactttgcgatcaacaagaaaaccggcaccatcgccgtcgaagcctgtccgacgcc
cggaacgtcgccgtgtctggattacgagcaacagacggaatatttcctcacctacaaggc
gacggacgacaacggggaaggacagacaacgagcgtttcattgcgcatcagcttagtgga
cgcgaacgatagtccgccgcgcttcctgcaggataaatatcgcgcggtggtggacgaggg
tgcggagaaattcgagcccgagctgaaggtgcaagcgcgcgacaaggacaagacgtccaa
gatcacgtacgctctggtaggcggtaacgagctcggcttgttcgctgtcgacccggacac
cggcgagatcaccatcaaaagtccggtcgacatgaccaacgccactcacgactggatcga
cctgacaatacaggcgagcgacggcaagtttgtcgactctgcgctcgtcaacatcaccgt
ccgcgacgttaacaacaatgcgcccgtgttcccgcatgacatatacacggccagcatcgc
ggagatatcgccgatcggaactgtcgtgggggaggtgaccgcaacggacgccgacagcgg
agtcaatgcggaattggtctatagaatacagaagggagctttcgacgatttcgccatcaa
tgagaccaccggcgtcgtcacggtatcccgaaaattggactacgatgagaagaacacgta
tcacgtggaagttatagcgctcgacaaaggaacaccgagcctgactggaacgacgacact
aatgatcgaagtggagaacagcaacgacaaggccccgtattttacccctgaaacgcagcg
agccgaagttacagaagacacgccaatcggcaccgttttcacaacattgaaagccacaga
tccggacagcacgaatctcgaagctttgaactttgccatttccgaaccaatcaccgctat
tgatagaaatggccaacgcgttaacgacagcaaatcttttaaggacttctttgcagtcga
tcgtgccaccggacaggtttccgtcgtccgagccttggatcgtgatatagcagcgacggt
aagcgttacaatagttgtaagcgacaccacggcacccacattgcaacagggacgaggcaa
actggtagtcactatcatcgacgtgaatcacatggcacccgaatttctaaagccgtggac
ccgagaaaatccccggtatctgatagagatgcaagaggagcaacccaccggtgctgtcgt
aggtgcttttacggcaacagacgctgatagtaacatagcgggatacgccatcgatcctcc
gagcccttacttcaatattgataatattaccgggatcgtaagaaccagtcaagtgatcga
ttatgaagaaacgaaacaactggaattcatggtggtcgcttatgattctggagtgcccca
actttccgcgactgcgagagtcatagttactgtgatcaacgtaaacgatcagaatccgaa
attcgaaaaggaactgtacaatgcgtcggtaaaagagaattctccacctggcactcgcgt
tatcgttgtaaaagctacggatggcgacgagggatctttcggtgatgtcagttacagtct
aattggtgaacatgccgctgactttaacatcggacatgaaaccggagaaattaccgtggg
cggggccacagttctcgacagagaaatgacgccggaaatcactataacggtgatggccag
tgacggcgcccatgtaaattctcggcgaagcaccaccgtgccggtggttgtcaaattaat
tgacgagaatgataacagaccgatattctcgcaacacagctatagagcttccgtagcgga
gaatttatccgttaacccaccggcgcctatcttacaggtacgagcggtagatcaagatga
cgggacaaacggcgaagtctggtacacaatcatcaatgggaacgaaaatgaatcattttc
gttaaaccgcgaaaccggcattctttatcccgcggctgcgctcctcggcagagccggttc
ttacagaatcgaggttgaagcacgtgacggtgccggaaacggtccacattcagacagatg
ttatgtcgacataagagttacacctgtgaatcagcataaaccgcaattcgtgatgccgga
attgacgaacgcaactgtggaagttccagagaatgcaggtgtgccgaattatttaatact
aactgtaaaagcgatcgacagagatcctggcgagaatggtcgtgtcagttatcacttaaa
agtcagcaataggaacgttcaagaaaccgaagaattttctatagatcaagaaaccggcga
acttcgatcgaaaattatccttgatcgtgagatcaagagtaaatttgaacttgttcttgt
ggcagccgatcatggtagtcctactgcgtatgaaacattgcgtttattaacagtccaatt
agttgatacaaatgataacgtaccacaattttatgaggaatataatttccatgtgtccga
aaatcgaccaaaagattatctcattggtaaagttacagcagaggataaagatgaaggcag
acacgctaaggtttactattacatagaagcaggaaatgaaggatatgccttctacatgga
taaatctgatggcagtatttatgcaaataaatcatttgatcgcgagacaagagataaata
tattctctctattctcgcatccaacgatcctgatctctacatcagtcccgcgcaatctgg
tcgaccgttaactcacaatccggaacatgggcacgtgaacgtgacgataaccgtgctgga
tgaaaatgataatccaccaatctttgaacgcaacgattattatgccggcgtgaattccat
ggcgaacataaacgattttgtgaccaaagtaactgcgtccgacttggacgtcggtgataa
cggcactcttcattattacgtcgccagcgcgaatctttacaaatacggttcggaaaaacc
gagtggctcaatagtgccgagcccgtttaatgttacgcaagacggaaaactcgttacgag
cggatacatggcggaatacaatcaagatagatttattgttgaagtcatcgccaaagaaac
ggctattccggaaagatacgcgatgaccaaagtccatgtatgggtgtttgaaccatctca
actaatacgagtcatattatcccggcctccggaggaagttaacagtgaacgagacgagat
tgtttcggaattatccaacgccacgcaaagcagagtcgtagtggatgatatcagatatca
cgttgacgcttctggacacatccgcagagaatggtgtgacatgtatttgcacgtcgttga
accgaaaactcaaaccatcgcgccgattcctcatgtgctcaaggttattgatgcaaaata
cgatttcttgaagcattattatgctggatttgccatagaaaatgtcgtacctgcatacgc
tggagttcaagaggaaccgtttgatcctgcactcgctgctttaatagctctcttagttgt
cttactcgtaggcgcggtcacggtaacggtagtttgttgctgtttacgccattgggtaat
aactgtgccaaatgatatacgtaagaaggatggcctaattaagaaacagatcatcgatga
attaaacacgacggagaacccactgtggatcgagcaaaaattgaagctctacgaggagca
agaattaacgatgcaagtgtttagcgagcccgagggcggtctcggcggcgagagacgtgg
cagtggtgtaagtgtcggcatgggtgacacgtctcaagataatacttatgctaccatcca
gcatccattgcctgcgaacaggcatcgtccgaccacgccggattacacaacgcttccagg
aaatcacaatttatacgaatcggcaatgggttttcaaggctcaacattccaaccttcccc
gaatgtgatgccgcagctgacagtcgaccgtgacggtcaaccccagttcgtttcggggct
aatataa
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