Pogonomyrmex barbatus (red harvester ant): 105428104
Help
Entry
105428104 CDS
T04903
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbar03036
]
105428104
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pbar04812
]
105428104
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105428104
Cytoskeleton proteins [BR:
pbar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
105428104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_2
Vac14_Fab1_bd
Cnd1
HEAT_EZ
MMS19_C
Adaptin_N
Arm
PDS5
Ecm29
Sec7-like_HUS
Sec6
Motif
Other DBs
NCBI-GeneID:
105428104
NCBI-ProteinID:
XP_011638496
UniProt:
A0A6I9WGW1
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MALNPRDMDGFMPLLSTTDIKKKLNVGSALLNYLGDSGKSIECQDIGMFIDNVIPWLGNG
NPKVVQNGLEILTYLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQNLLDRLRPAFNHKNAKLREEALILLTTTLNEHGADEMALSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKMLLLIEKFDQLKAAGDLLPLAMSSD
VGKDSDELDRAIKSAPVKRLNMPPKRGQFGPARTPVSALAPGTPSYTVPRATTVKRALSV
RSTSAQAGAVDEESFITSFEDVPPVNLFSAKDLEEQMKVIKDTVGDDKKDWKQRMDSMRK
LRAIVLAGGTNYENFHECLKNVQRPFELACTDLRSQVVREACITLAFLSQSLKTKFASFG
EAVLLTLMNLIQNSAKVVATAGAVAVRFILQNTHCSRYVPIIISCVSNKSKDIRRASWEY
LALILQTWPTQILQKHITVLPDALKKGIADSDAEARVFARKSYWAFKNHFPEQAEILLNN
LDASYKRSLMSLSNSGSSNSLNVVANARSSSVSPRTARPVMSAAGSTENLHQTTGQPQGP
LRRTPSLPRSYRQSGIPILQRPTDSHYRGTPGVRSTSAIDLQAAQRAKARLMYANMSRQK
AAAALPRPSKSPDPNAVASPERIARTRTRVSGVSQSQPSSRSGSPSSRLSYATYNREGES
LIGRPRRLSGHTIGSTSNSREPSPQRFGMDRSFASKLRGRNLHMSPTDSTRPPVMAQKML
QKSREAESALADALTFDSIDSYTRIPGNKGDHSDDSENSSICSERSIDGYRRASDSFSWS
GSQPRLYRDLWDQSIPKDIKEIIENCGHKHWGDRKEGLVGLQHYLSSGNTLTATDLRRVT
DIFTKMFMDSHTKVFSLFLDTLNELVITHNEGLGDWLYVLCARLLNKLGTDLLGSIQAKI
HKTLDVVRDCFPGQQLLPAVMRYLTDPTQTPNSRVKVAALTFITQIAETAEPSALGSSAA
TALARLLDWSNDGKSHDVRRHAQNAVISLYNLNPPQVTMILSELPKYYQETAWPLVQNHL
RKSSASSNPASPGTPPPRAQSSPARTKAKNDVKVEMKTEIDGGDENLEEVYKSLRRTTAE
IQNYGFERLERATTSKDSGISNMADVEERMEGLTLSNSGRSSSVSSPTQRGRSVSNITVN
GSDTIAGDLILPQENNGYKTHGSSPDLINRPEIVDNMVKTLQSKVAQTSEKVAALQEFQL
YVREGDSSYIKRNFKKVLKVLLDSLSNDAKVVQVEVLQTLIDMLKCPELVESFSSYNELL
VLKVIYAYKSDDQKVDSSGGSGGRSPVHWNAEKCAATMAMVLKPEQIIHLVSTIIATESY
PLNMGAIKMLHKVVEHWGRDAIEPHLANVMPGLIKAYDDAESAVRKSAVFCMVAIHVAVG
EEVLKPHLSCLYSSKLKLLNIYIQRAQQQANSQPASPRSNNKN
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaatccgcgtgatatggacggcttcatgccgctcctgtcaacgacggatatc
aagaagaagctcaacgtcggcagcgcgctgctcaattaccttggcgattcgggcaagagc
atcgagtgccaggacatcggcatgttcatcgacaacgttataccgtggctcggcaacggt
aatcccaaggttgttcagaacggactagagatcctcacgtatctcgccgatcggatgggt
cacgacttcaagccttacatctctaccatcatccagccgacgatagatagactaggtgac
agtaaagatgctactagggaaaaggcgcaactggtgctcctgaaaattatggagaaagga
tgtatgtctcctcagaatcttctggatagacttcgtccagcctttaatcacaaaaatgca
aaattacgagaggaagctctcatcttattgacgacaacgctgaacgaacatggagcggat
gaaatggcgttgtcaggggtaatcccgagtatcgtaaagttgctatctgatccatcggaa
aaggttcgggaaaccgctttgaacacgctggcggacatctatcgacacgtaggcgaaaga
ttacgcgtcgatttgcaaagaaagcacaatgtgccgcaagccaaaatgcttctgctaata
gaaaagtttgatcaactaaaggccgccggtgatcttttacccttggcgatgtcatccgat
gttggcaaggatagcgacgaactcgatagagcgatcaagtcggctcccgttaaaaggttg
aatatgcctccaaagagaggtcagttcgggcctgccagaacaccagtttctgccttagct
cctggtactccatcctacacggtcccaagggcaacgaccgtcaaaagagcactgtcagta
agatcaacatcagcgcaagccggagccgttgatgaagaaagctttattacttcattcgag
gatgtacctcctgtcaatctattctcggcaaaggacctcgaagaacagatgaaagttatc
aaggataccgtgggtgatgataaaaaggactggaaacagagaatggatagtatgagaaag
ctaagagccattgtactcgcgggtggcactaattatgaaaatttccacgagtgcctaaag
aacgtacagcgaccattcgagctggcctgcaccgaccttagatcacaagtagtgcgagag
gcgtgtataactctcgcctttctgagtcagagtctgaagaccaaattcgccagttttggc
gaggcagttttgctcacgttaatgaacctcatacagaacagtgccaaggtcgtggcgaca
gccggcgcggtggcagttcggtttatccttcaaaatacccactgcagtcgatatgtgcct
attattatatcgtgcgtgagcaataagagcaaagacattcgcagggcgtcctgggaatat
ttggctttgatcctgcaaacctggcctacgcagatattgcagaagcacataacagtactg
ccggacgcactcaagaagggcatcgcggactccgatgcggaagcgcgagtctttgccagg
aaatcatactgggcatttaaaaatcactttccagaacaggctgagatcctacttaataat
ttggacgcgtcatataaacgctccttgatgtctctcagcaatagtggcagtagtaacagc
ttaaatgtcgtggctaatgcgagatcgtctagtgttagcccgcgtacagctagaccggtg
atgagcgcggcaggtagtacggaaaatttgcatcagaccacgggtcaaccgcaaggtccg
ctcagacgtaccccgtccttgcctcgatcttatcgtcaatctggtatcccgatactacaa
agaccaacagacagtcattatcgaggaacaccaggagttagatctaccagtgcgattgat
ctgcaagctgctcaaagagcaaaagcgagattgatgtatgcgaatatgagcagacagaaa
gcagcagctgcacttcctcgtcctagcaaatctccggatcctaacgctgttgctagcccg
gaaagaattgcaagaacaaggacaagagtgtcgggagtgtcacaatctcaacctagcagt
agatcgggttccccatcgtctagattaagttacgccacatacaatcgagagggcgaatca
ttgataggtagaccgagacgattatccgggcacactattggtagcacaagcaatagtcgc
gaacccagtccacaaagattcggaatggataggagtttcgcgagtaaactaagagggaga
aatctacatatgtcaccaacggacagcactaggccaccagttatggcgcagaagatgctg
cagaaatcacgcgaggcggaatccgctttggcggatgctctgacctttgatagtatcgac
agttacaccagaataccaggcaacaaaggggatcacagtgatgacagcgaaaatagcagt
atatgctcggaaagaagcatcgatggttatagacgagccagtgattcgttctcatggagt
ggctctcaaccgagactatatcgtgatctatgggatcagtctatcccaaaggatatcaaa
gaaattattgaaaattgtggtcataaacattggggagacaggaaagaaggcttagtgggc
ttacaacattatttgagcagtggaaacactttgacagcaacagatttgcgtagagtgacg
gatatttttacaaaaatgtttatggattcccataccaaggtattcagtttatttctggac
acgttgaacgaattagtgattactcacaatgaaggtcttggcgactggctatacgttttg
tgcgcgaggcttcttaataaattaggcaccgatttattgggatccatacaagccaaaatc
cataaaacgcttgatgttgtaagagactgtttcccgggccaacagcttctaccagctgtg
atgaggtatctgacagatccaacacaaacacccaattctcgcgtgaaagtagcagcattg
acttttatcacgcagatcgctgaaacggcagaaccgtccgcgctgggcagttctgcagcg
acagcacttgcacgactgctcgattggtcaaatgatggcaaaagccatgatgtgaggaga
cacgcgcaaaacgctgtgatatcactttacaatctcaatccacctcaagttactatgatc
ctttctgaattaccgaaatactatcaagagacagcttggcccctcgtacaaaatcatcta
aggaaatcatccgcttctagtaatccggcgtcacctggcacgccaccgcctagagcgcaa
agctcgccagctcgaacgaaagcgaagaacgatgttaaagtggaaatgaagactgaaatc
gacggaggagacgagaacttggaagaagtatacaaatctctacgacgcacaaccgccgaa
atccagaattacggctttgaacgtttggagagagccaccactagtaaagacagcggtatc
agtaatatggccgatgtagaagaaagaatggaaggtcttacattatccaattcgggtcga
tcttcatccgtttcctcaccgacgcaacgaggacgatctgttagtaacataactgtgaat
ggatctgatacgattgctggtgatttgattctacctcaagaaaataatggttataaaacg
catggatcatcccctgatttgataaacagaccagaaatcgtggataatatggttaaaact
ctgcaatctaaagtggcacaaacttcggagaaagtagcagcattgcaagaatttcaacta
tatgtccgtgaaggcgattcatcatatattaaacgaaacttcaaaaaagtgctcaaagtc
ctgttagatagcttgtccaatgatgctaaagtggtacaagtagaagtgttgcaaacgcta
atcgatatgcttaaatgtcccgaattagtagaaagcttttcctcttacaatgagctattg
gtattaaaagttatctatgcctacaaatcagatgatcaaaaagtcgattcttccggcggt
agcggtggcagatctccagtccattggaacgcggagaaatgcgcagcgacgatggccatg
gttctaaaaccggaacaaattattcatttggtttctactataattgctacagaatcgtat
ccactaaatatgggcgcgataaaaatgttacacaaggtggtggagcactggggtcgagat
gctatcgaacctcacctcgccaacgttatgccgggccttatcaaggcttatgacgatgcc
gaaagcgcagttcgcaaaagtgcggttttctgtatggtagcgatccatgttgcggtcggc
gaagaagtactgaagccacatctgagctgtctgtattccagcaaacttaagctcttgaac
atctacatacagcgtgcacagcaacaggcaaacagtcaacctgcaagtccgcgtagtaat
aacaagaattaa
DBGET
integrated database retrieval system
