Pogonomyrmex barbatus (red harvester ant): 105430090
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Entry
105430090 CDS
T04903
Name
(RefSeq) DE-cadherin isoform X1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Laminin_G_2
Laminin_G_1
Cadherin_3
RET_CLD1
Circovir2_Orf1
Rep_fac-A_3
DUF443
Motif
Other DBs
NCBI-GeneID:
105430090
NCBI-ProteinID:
XP_011641739
UniProt:
A0A6I9WGA4
LinkDB
All DBs
Position
Unknown
AA seq
1525 aa
AA seq
DB search
MVERHWSWWWILGPLTMPRICVARPSHWARPQRSLVAISTFLFIGLVVCSGTLASATRLR
HSRHLDVRSQFLGEGELLDDENHNHKPVFSDCSNYAPTVKEEEPIGTVVFQVHAEDRDPP
EEGGTITYSLVTGPDERIKFTINNRTGLIRTTQWIDRDEPSREKEFYLTVLATDNGRPQL
DAVCTFKVTIEDINDNEPVFDKVVFRGDVWKAYTESVPQDLPVGREVMRVSATDIDDGDN
SIVRYGLTAKKSEDAEYFRIDRDTGVIFLAKAIKRNPDYKFNMIASAEDTGEIPKSYVID
LDIRVVESHKKAPTFLPRPSEPIKLQENFSDFDASIVHLKAISNIDNSSNYDNSYLVFEL
VTGRTEQSNKKNTFRLESNKDVADIKLSQHLDYESNRQYSLIVRVQNKYQLAAETLIDIE
ILDVNDNIPVFRDIKRGSVLENEPRGVPVMQVQAIDADGTSANNQVTYQLDNFKDLFAID
PQTGNITTLVTFDREVEDTYNVKIIAMDNSPSALFKTGEHNRGQQVFQIEIADKNDNPPR
FTQKVYTHNSVYENVNINAPITTVEAIDSDTASPVTYSIIAGNTDNSFYIEATTGKIRVN
KTLDYEKITKYNLTVKAFDGVFNDTAQVEIFVENVNDNPPVFEEFNTSPNINEETLVDGC
ITTVIAYDPDIEDRNADQHIAYFIVKEDQQLLIGIDKYGCLKLKKPLDRDPPNGYSTWPV
IVMARDEDGSSTALSSLVSVNITLNDINDNAPFLDIPYPVIWGENKPAGKITDLKARDYD
SEENGPPFEFRIAENADDEIKSKFDIRETNLYTQVVFDREERKSYDIPIAITDSGKPSLT
GTSTLTVIIGDENDNRMQEGSSSIFVYNYKGEAPDIEIGRVYVNDPDDWDLPDKSFDWAS
PHDGFHLNTSTGMITLLSGISNNTFVLKFIVTEQGRLIDSHQVHAYVNVTIKELPEEAVD
RSGSIRFYGMTAEQFVEPDESGVSKKEIFQEKLATMLNTSIENVDVFTVLHSPHHNNKSL
LDIRFSAHGSPYYAPEKLNTILAQHSKEIEREMKADILLVNIDECLIEKLHCNDSNCRNF
LNVSNIPYGVYTNTSSFVGVRAVVDPQCTCHVAEPIVCLNGGTPLTARCECPPGLEGPRC
ELLGIGFRGDGWAIMPPPGQACADSHLGLEITPHTENGLVFYFGPMTYSPKLGIQDFMSL
ELQQGFAVLYVDYGTGTVRLDHKQIKLTDGRNHRIDIYWTKTSIEMIVDKCSISACMSLT
APYGRNEFLNVNSPMQVGGTVTNLAYLASKLGWSYEPTDKGFVGCIRNMTINGNTYNLGM
PSLSRNADPGCDHSMAKAISFGIDTNFIVAILVCVLILLILLVAVVVHRRKTDDLYKDMD
DIRENIINYEDEGGGEVDTGYDLNVLRAIYDAPPIDSKIAPVGLQGRGADEVPDICGFLD
GKKESCDKDPDTNPFDDVRHYAYEGEGNSEGDLSSLASCTDDGDLKFNYLSNFGPRFRKL
ADMYGEDPSDEESDGVGERESESWC
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaacgtcattggagctggtggtggattctgggaccgttgacaatgccgagaata
tgcgtcgcacggccatcgcactgggcgaggccccagcggtctctcgtcgcgatatccacg
ttcttgttcatcggcctggtggtctgctctggaactctcgcgtctgcaacgagattgagg
cactcgagacacctggacgtgagatcgcagttcctgggtgagggtgaattactggacgat
gaaaatcacaaccacaagccggtgttctccgattgctcgaattacgcgccaacggtgaag
gaagaggaaccgattggcactgtggtgttccaagtgcatgccgaggatagagatccaccg
gaggaaggaggtactatcacgtatagtcttgtgactggtcctgacgagaggataaaattt
acaatcaacaatagaacgggtctcatcaggacgacccagtggatcgacagagatgaaccc
tccagagaaaaggagttttaccttacggtactcgcaaccgacaatggaaggccgcagttg
gatgccgtatgcacatttaaagtcactattgaagacatcaatgacaacgagcctgtattc
gacaaagtggtcttccgtggagatgtgtggaaggcatatacggaatctgtgccacaagat
ttacctgtgggtcgcgaggtcatgcgcgtttctgccactgatatcgacgatggcgacaat
tccatcgtacggtatggtctaacagctaagaaatcggaggatgctgaatactttcgaata
gaccgcgacaccggtgtcatattcctggccaaagctataaagcggaatccagattataaa
ttcaatatgatagcttctgccgaggatactggcgaaatcccaaagagctatgtcattgat
cttgacatacgagttgtggaatcgcataagaaagcgccaacttttctaccgcggccgtcc
gaaccgatcaaacttcaggaaaattttagcgacttcgatgccagcattgtccatttgaaa
gcaattagcaacattgataattccagtaattatgacaattcctacttagtctttgagctt
gtgactggcagaacggaacagtctaacaagaaaaacacgttcagattagaatctaataaa
gatgtagcggatatcaagttatctcagcatcttgattacgaaagtaacaggcagtactcg
ctaatagtaagagtacaaaacaagtatcaattagcagctgaaacacttatcgatatcgaa
atattagatgtaaacgacaacattccagtcttccgcgatatcaaaagaggaagtgtgtta
gaaaatgagccccgaggtgttcctgtaatgcaagtgcaagctattgacgctgatggaact
tccgctaataatcaggtcacttaccagctggacaactttaaggacctctttgccatcgac
ccgcaaaccggcaatattacaacattagtaacattcgacagagaagttgaagatacctat
aatgttaaaataatagcaatggataattcgcctagtgctttgttcaaaaccggggaacac
aatagaggacaacaggtgttccaaattgaaattgctgataagaatgacaatcctcctcgg
tttactcagaaagtgtacacccataattcagtttacgaaaacgtaaatattaacgcgcct
ataactacagtcgaagctattgattccgatacggcgagtcctgtcacgtacagcatcata
gcaggaaacactgataacagcttttacattgaagctacaacgggaaaaattcgcgttaac
aagacacttgattatgaaaaaatcaccaagtacaatttaactgtaaaagcgtttgacggt
gtattcaatgatacagcacaagtagagatttttgtcgaaaacgttaacgataatccaccg
gtctttgaagagttcaatacaagtccgaacataaacgaagaaacattggtggacggatgt
atcaccactgtgatagcttatgacccagatatcgaagacagaaatgccgatcaacatatt
gcctattttatcgtcaaggaagatcaacaactcttgataggaattgacaagtatggttgt
ttgaaattgaaaaagcctttagatcgtgatccgccgaatgggtattcaacgtggcctgtt
attgtgatggcgagagacgaggatggttcgtctacggctctttcaagtttggtgtcggtt
aacattacgctcaacgatataaatgacaatgcaccgtttctcgatataccttatcctgtc
atttggggtgagaacaaaccagctggcaagataaccgatttgaaggcacgggattacgac
tccgaagaaaatggcccgccatttgaattcagaattgccgaaaacgcagacgatgaaatc
aaatctaaatttgacatacgtgagactaatttatatacgcaggtagtgtttgatcgcgaa
gagcgaaaaagttacgatataccgatcgcgatcacggacagtggtaaaccgtctttgacc
ggtacttccacactcactgtgatcataggcgacgagaatgacaatcgcatgcaagagggc
tcgagttccatatttgtttacaattataaaggagaagctcctgacatagaaataggacgc
gtttacgtcaatgatccggatgattgggatttgccggataaatctttcgattgggcttct
cctcacgacggttttcatttgaataccagtaccggcatgatcactctattgtcgggtata
tcaaataacacttttgtattaaagttcatcgtcaccgagcaaggacgtcttattgattcg
catcaagtacacgcctatgtgaatgtcactatcaaggaacttcctgaagaggccgtagat
agatccggttctatacgattttatggtatgacagcagagcaattcgtggagcctgacgaa
tctggcgttagtaagaaggaaatattccaagaaaaattggcaactatgctgaatacatca
atcgaaaatgtcgacgtattcactgtgcttcattcgcctcatcataacaataaaagcttg
ctcgacattcgattttcagcgcacgggagtccttattacgctccggagaagttgaacacg
attttagcgcaacattcgaaagaaatcgaacgggagatgaaggcggatattttgttggtg
aacatcgatgaatgcctaatcgaaaaacttcattgtaacgattcaaattgccgtaatttc
ttgaatgttagcaacattccatatggtgtttatactaataccagctcgtttgttggtgtt
agagcggttgtagatccgcaatgcacttgtcatgtagcggagcctattgtctgtttaaac
ggcggtactcctttgacagcacgatgcgagtgcccacctggtctagaaggtccgaggtgc
gaactattgggtattggctttcgcggagatggctgggctataatgccgccacctggtcaa
gcttgcgccgattcacatttaggattggaaataacgccacatacggagaatggtcttgta
ttctatttcggtcccatgacttacagtcctaagcttggtatccaagatttcatgtctctg
gaacttcaacaaggttttgctgttttatatgtagattacggaacagggactgtaagacta
gatcacaaacagatcaaattaacagatggcaggaaccacagaatagacatttattggacg
aaaacttcaatagagatgatagttgataaatgcagcatctctgcttgcatgagtcttact
gcaccatacggccgaaatgaatttctaaatgttaacagtccaatgcaagtaggcggtaca
gtaactaatttagcatatttagcatcgaagttaggatggagttatgaaccgactgacaaa
ggattcgttggttgtatacgtaatatgacaatcaatggaaatacgtataacttgggtatg
ccatcattatccagaaacgcagatcctggctgtgatcatagcatggcaaaggccatctcg
ttcggaattgatacgaactttatagtagctattttggtttgtgtattgatattactaata
ttgcttgtggcggtagttgtgcatagaagaaagacggatgatctatataaggatatggat
gatatcagagaaaatattattaattatgaggacgaaggaggcggtgaagttgatacgggt
tacgatttaaatgtcctgagagcgatttatgatgcaccacctatcgactcgaaaatagct
ccagttggcctacagggtagaggggccgacgaagttccagacatttgtggctttctagat
ggtaagaaagaaagctgcgataaagatcccgacacaaatccatttgacgacgtaaggcat
tacgcttacgagggagagggcaattcggaaggcgatttatcgtcattagcttcctgtact
gacgatggagatctcaaatttaattatctatctaactttggaccaagatttaggaaattg
gcagatatgtatggagaagatccgagtgacgaagaaagtgatggcgttggtgaacgagaa
agcgaaagttggtgttga
DBGET
integrated database retrieval system
