Pogonomyrmex barbatus (red harvester ant): 105431607
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Entry
105431607 CDS
T04903
Name
(RefSeq) cadherin-23
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
105431607
NCBI-ProteinID:
XP_011644187
UniProt:
A0A8N1SAR8
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All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MTSDKQTRSSSWLLRSCKRSRFKVELLYVVLGYLLTYCSARNNPPRFLIDGQTEIVLRLK
EGPETPIGSLIYKLKGIDPDNDILTFDVRDQPDINDNVPIFRPHPTSLTLREDSRPGILT
TVEATDADLGAHGQVVYYLQELDGDNNVFSISTVNGKGVIRLVGSLDYERKYLYQLRILA
VDRAINEKVNTGTTAILIKVQDVEDQPPEFIAMTPVARISENVRIGTSVLQVRAVDGDKG
INNKVTYSITKGPRYLFDIDATSGLVFTRAQLDREAEENSDGTFILEITVKEVSKINPPP
SVSTEVTIILTDVNDETPTFRSMLYRAEINENAPENTPVNFIGDAVPEIFDHDLGTNGTF
QIFIEGDGGIFDVTPFRGINEAPFLIRVKDSSKLDFEKISVVNFTLVAKEVTPVSPKYSA
VPVTVFIKDQNDNYPEFTKSIYEVSIPENCVEGTTVAWVQALDGDSGNFGTHGIRYTTLG
GSIAHALAMDPLTGVITVKHPGPNFDRELVARHFLTVEARDHLGKGNRNAAQLIINIDDV
NDNAPIFLQNKYEAVLLENEDHFESPLIVEASDNDLNGTRNSEIVYALVSSEFSRNFTID
PKRGVVTPIHPLDYEALPINQGHKETIIRQLKLTVRARDMGTPSRTSDVPLIVYLKDIND
NAPVFERVLYKRSISEDLPGGTSVVQVKAWDKDLSSPNNKLVYRIQSGAGDKFVISPETG
VIRVAPGSNLDPDLTSPKTTRYNLNVIAIDSGTEVQRTAEVLVNITILDVNNKPPVFIDP
GTVTIRENTQVGAYVHRIMAQDPDVAPILRYRVDPNSSEARNEEGTLIKVQEYDYLAALE
LNALDGLLRIVRLLDREKVETIRLGLVVEDLAAIRGLQTASATLSIIIEDENDNNPKFRR
PFYRRSVTENSKNGVNIANIVADDADKNRSITYSLQGPKEITDLVHLDPETGEMVVANKI
DREMYSWLNLTVKATDSGIPSRSSLSEVYVQVLDENDNNPYFISNISNVTVIENSKIGTE
ISVIQATDSDSGDYGKITYLLDRMSSQGTFAIHPETGSLTVADIIDWEIKHSYVLVIEAW
DNYQFGYTAGESRNAFKQIQITVIDVNDNGPKMDLPQDCISISEFHDIRELIYVIKVKDA
DDPMTPNGRVIIRITSGNELGLFILEQTDYWTAKIKAALPLRGKFGNYTLNIETRDLGTP
SNKDNGILKICVTDYNDNPPLFVSPQHNTTIRVPENITVGSSVIQIEARDADTGLNGDVH
YRLKQDLAGHWKTFHIDEKTGVISLNLPLDRETQKLYEIRVEAYDLGTPTPLSSDLDLII
YVRNINDFEPQFSVSTFNINFTEEQLPGSEMALLPDTFDNDDVDDLDDPPTQVCYFIVGG
NDDGLFVLDIYKHELSTAKLLDREQQEEHVLLIKATEDCKTVPENETTFDKTDATLLQVV
VKVDDINDNAPQFIKNVFTGGVTTEADFGTQFMHVKATDADADDNAILSYYQVGKIHMTL
TEGFEDMQMQPFLVNKDDGAVSLNFDPQRGMKGYFDFMVLVNDTYGLQDTARVFIYLLRE
DQRVRFVLRQHPPEVRSRIETFREILGNVTSAIINVDEYKVHENQDGSVDRTKTDLYLHL
VNRRDNSILEVSEVLELVDRNIEKLDNLFKEFNVLDTQPAKPEPIIQYEQAGTTFWLLTL
TLFLGALLILCVALCLSQRASFRRQLKAANASPFGASDSEFIRSPGRVPNTNKHSVEGSN
PIWMHAYENEWFKSDESFSHTSERDSLDENALNNEEMMNEANTNVESIDVQNDFDRNSPI
YSGQNAIVNPLGKKIETTEL
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagataagcaaacaagatcatcttcctggctattgcgatcatgtaaaagaagt
cgatttaaagtggaattgttatatgtcgtattgggatatcttctaacatattgctccgct
agaaacaatcctcctagatttcttatagacggacagacggaaattgttctcagattgaag
gaggggcctgaaactccgattggtagcttaatttataagcttaaaggtatcgacccagat
aatgatatattgactttcgacgttcgagatcagcctgacattaacgacaatgtgccgatt
tttcgtccacatcctacctcattaacacttcgggaggattcgcgcccgggtattttaaca
acggtggaagccaccgatgcagatttgggtgctcacggtcaagtagtgtattaccttcag
gagttggatggtgataacaacgttttcagcatatcgaccgtcaatggcaaaggcgttata
cgcttagtgggttctttggattacgaacgaaagtatctgtatcaactgcggattttggct
gtagaccgtgcgataaatgaaaaggtaaatacgggaacgaccgcgattttgattaaagtg
caggatgtggaggaccaaccgccggaattcatagccatgacacccgtcgcaagaatcagc
gaaaatgtcagaattggcacatccgttttgcaagttcgtgctgtggacggtgataagggg
ataaacaacaaagtgacttatagcatcacgaagggaccgagatatctgttcgatattgat
gcgacttccggtctcgtattcacgagagcgcaattggacagggaggccgaggagaatagc
gatgggactttcattctagaaattacggtgaaggaagtatcgaagattaacccgccgccg
tctgtcagtaccgaggtaaccattattctcactgacgtaaatgatgaaacgccgacattt
cgaagtatgctataccgtgccgagataaatgagaacgcaccggaaaatacaccagtcaat
tttattggcgatgcggtaccagaaattttcgatcatgatttgggtacgaatggcacgttc
caaatattcattgaaggtgatggtggaatatttgatgttacgccatttcgtgggattaat
gaagcgccatttttaattcgcgttaaggattcgagcaaacttgattttgagaaaatatct
gtggtaaattttactctcgttgcgaaagaagtcacaccggtttcgccgaaatacagcgcg
gtaccggtaacagtttttataaaagatcaaaatgacaattatcccgagttcacaaagagt
atctacgaagtgtcgataccagagaattgtgtcgagggaacgactgtggcttgggtgcag
gctttggacggagatagcggtaactttggaacgcatggaatacgatatacaactttaggc
ggtagcattgcacacgcattagcaatggaccctctcaccggcgtgatcacggtcaaacat
cctggacccaattttgatcgcgaattagttgcacgacattttctcaccgttgaggcacga
gatcatcttggaaaagggaatcgcaacgctgcgcaattgataattaatatcgatgatgtt
aatgacaacgctcctatatttttgcaaaataagtatgaggcggtgttattggagaacgaa
gatcattttgaatcgcctctgatcgtcgaagcatccgacaatgatttaaatgggacgcga
aatagtgagattgtctatgctctggtatcaagcgaattctcccgaaatttcaccattgat
ccaaaacgtggagttgttactcccatccatcccctagattacgaagctctacctatcaat
caaggacacaaagaaacaattatacgacaattgaaattgacggtgagagctagagatatg
ggtacaccgagtcgaacttctgatgttcctttgattgtttatttgaaagatattaacgat
aatgccccagttttcgaaagagttttgtataagagaagcatttcagaggatttacccggt
ggcacaagcgttgtacaagtgaaagcctgggacaaagatttgtcgtcgccaaataataaa
ttagtttaccggattcagagcggagccggagacaagtttgtaattagtcccgagacaggt
gtgatccgagttgcgccgggttcgaatttagatccggatctcacgtcaccgaaaaccaca
agatataacttaaatgttatcgctatcgatagcgggacggaagttcaacggacggccgaa
gttctagtgaatatcacgattctagacgtcaataacaagccgccagttttcatcgatcct
gggactgtcaccatcagagaaaatactcaggtcggtgcttacgtacatcgcataatggcg
caggatccagatgtagctccgatcttacgttatcgagtagatcccaattcatcagaagct
cgaaatgaggagggtactttgattaaagtgcaagaatatgactatctagcagcgttggag
ttaaatgcattagacggtttgctgcgtattgtaagactattggatagggaaaaagtagaa
actatcagactaggacttgtagtcgaggatttggccgcgataagaggcttacaaactgca
tccgccacgctgagtataattattgaggacgagaacgataataatcctaaatttcgaaga
ccgttttatagacgttctgttaccgagaatagtaaaaacggcgttaatatcgcgaatatc
gtcgctgacgacgccgataaaaatcgtagtatcacgtattctttgcaaggcccaaaagaa
atcactgatcttgtacatttggatcctgaaaccggagaaatggtcgtcgctaacaaaatc
gacagagaaatgtattcgtggctaaatttaactgttaaggccacggactctggaattcca
tctcgatcaagtttatcggaagtgtatgttcaagtcttagacgaaaacgataataatccg
tatttcatatcaaatatcagtaatgtaactgtcatcgagaattcaaaaattggcacggaa
atcagtgttatacaggcaacagattccgatagtggagattatggaaaaattacttatctt
ttagatagaatgtcatctcagggaacttttgctatccatccagaaacaggatcgttaaca
gtggctgatattatagactgggagatcaaacatagttatgttttggtcatagaagcttgg
gataattatcaatttggttatactgcgggagagtctcgaaatgcgtttaaacagattcaa
attacagttattgatgtgaatgacaatggtccgaaaatggatctacctcaagactgtata
tcgatatctgaatttcatgatatacgagagttaatttatgttataaaagtgaaggatgct
gatgatccaatgacaccgaatggacgcgttataattaggatcacttccggcaatgaatta
ggtttatttatattggaacaaactgattattggacagcaaagataaaagctgctttgcca
ttgagaggaaaattcgggaattacacgttaaatatcgaaacgcgcgatctgggaactccg
tccaataaggacaatggaattttgaagatatgcgtcacggattataatgataatccccct
ttatttgtcagtccccaacacaataccaccatccgtgttccagagaacataacagtagga
agttcagttattcaaattgaggcgagagatgctgatacgggattaaatggcgatgtgcat
tatcgtttgaaacaggacctcgcgggtcattggaaaacttttcacatcgacgagaaaacc
ggcgtaatatcattaaacttaccgctcgatagagaaactcagaaattatacgagatacga
gttgaagcatacgatttgggtactccgacgcctttaagttcagatctcgatctaattatt
tatgtgcgcaacatcaacgatttcgagccacaattttcagtgagcacttttaatatcaac
ttcacggaggaacaactaccaggatcggagatggcgttacttccagatacgtttgacaat
gacgatgttgacgatttggacgatcctcccactcaagtctgttatttcatagttggcgga
aacgatgatggattattcgttttagatatttataaacacgaactcagtactgccaaattg
ctagacagagaacaacaagaagaacatgtgttacttattaaagcaacggaggattgcaag
accgtgccggagaatgaaacaacattcgataaaaccgatgccactttattacaagttgtc
gtaaaagttgatgatatcaacgataatgcaccgcagtttattaaaaatgtttttacgggt
ggcgttaccaccgaagccgactttggcacgcaatttatgcatgttaaggcaactgatgcg
gacgctgatgacaacgctatactcagttattatcaagtgggcaaaattcatatgacatta
actgaaggtttcgaagatatgcaaatgcaaccttttttagtaaataaagatgatggagca
gtgagtcttaattttgatcctcaacgagggatgaagggctattttgattttatggtactt
gttaacgatacatatggtttgcaagacacagcgagagtttttatctatttattacgagaa
gatcaacgggttcgttttgttctccgtcaacatccgccagaagtcagaagtagaattgaa
actttccgagaaattttgggtaatgttaccagtgctataattaacgtcgacgaatataaa
gtgcatgaaaatcaagatggttctgtagatagaacgaaaacggatttatatttgcacctc
gtgaatcgtcgagacaattcgatcctcgaagtatccgaggtccttgaattggtcgacagg
aacatcgagaaactcgacaatctattcaaggagttcaacgtcctcgacacgcagccagcg
aaacccgaaccgattatacagtacgaacaagccggaacgactttctggcttctcacgttg
accttatttctaggagctttactgattctatgtgttgctctatgtttgtcccaaagagcg
tcttttcgcaggcaattgaaagcggcgaacgcatcaccgtttggtgcatcggattcggaa
tttatcagaagtcctggtcgcgtgccgaatacgaacaaacacagtgtcgaaggatcgaat
cccatatggatgcacgcttacgaaaatgaatggttcaagagcgacgaatcattcagccat
acctccgaaagagattccctcgacgaaaatgcacttaataatgaagaaatgatgaatgaa
gctaatacaaatgtggagagtatcgatgttcaaaatgactttgacagaaattcaccaatt
tactcgggacaaaatgcgattgtcaatccgttgggaaaaaagatcgaaacaacggaatta
tag
DBGET
integrated database retrieval system
