Pogonomyrmex barbatus (red harvester ant): 105431845
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Entry
105431845 CDS
T04903
Name
(RefSeq) cadherin-89D
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
DUF4683
Motif
Other DBs
NCBI-GeneID:
105431845
NCBI-ProteinID:
XP_011644599
UniProt:
A0A6I9WX79
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MSLRRRTSTFPSSPPLHSWLITVVLLIFSVQVHRVTGCQFYPVGEYLKFVRVPENLETGT
EILSLEAHPRNRLAITAVDKEEDAGFFAYKETNETHVSLILAQSLEDLVDAESPRNLLKF
RVSCDSGSGDSLVSSHLSVTVYVEDINDHAPQFVDAPYHVTVDELTPVGVTIFRGIHALD
GDKPNTPNSDVYYAIVKGNEQGKFSLESGHRTALILRKPVDYDSGDREFTLVITATDRGV
PARSTNSTVKITVVDNDDLDPKFTRDIYKAKIYEFYPMPEYPIFMEINFTDPIHAADRDR
DINVPVRYDIISGNERGFFHLDPKNGSLFLKRAIDLDAERSLPGNTFNLQIHASQVDNPL
KMTVARVEVEMMDLNDNLPQFEVDLYNISIVENLPNGFSVLQVIARDKDQGENGEFDYQL
EDPAGAFSVDRESGWLTVKDQTVLDREKRDHLKMKVYAVEHRPSVVVTSEAGSKGSSVDV
EITLLDANDNNPIFVPGNLYELVARSDVKVGTVLGQVHAVDDDLGPNGLVRYRLQKPGNS
TLRKPPFAVDESTGLITVSESPILEGRHAIFVEAADQPANPSERRFSLAVVTVDVFRADG
PNSWKPDFVGAPYEFWVGANVPVGTSVGQIRLNDAVKTNDLIYDLLHGYEEGVPFAVEER
SGTITVVEEIERFDHSIYDFEAVVSDERELTLITNVSIHVVDPNDNRGILTKGTTTAPLA
FHVKENIPGALIGQVLPQNGTTAAMSGTQFLIVNQQDVPDIAIMENGSLYAPQGLDREIR
ENYSITVIAESLRGVGVFQVRIVVDDENDHAPEFTLPAYEGRIMENSPAGTEVTLTNPIA
ASDKDEGENRDFTFALQGDDSGLFTIDSITGRVYFEGIDEPLDRETRSSYEFQVIATDSG
GLKSESSLKITVLDANDNPPKFIRMIVLPDQGVRVSNNPSEDTSAEIEDEGNQSDNPVGG
GRRSPLLLVPENTTIGVPIIRLLADDKDEGVNAAITYSLGNETTSSGVRSRRYDATSRRY
FHLDPRTAEISVARGLPPEKDIRLFILARDPDGLADNITVRIHVTDVNDHAPVFDKSWYT
FDVAEGSYTDYAVGTVQALDADFGENANLSYELITSHEDSKRAGNASRSFDVDSYEGIIR
VSGTLDRERATTHRLLVIAHDQGSPSLSSSVEVEINVLDVNDNAPTFHGYDELEDDRLPV
YRVSVLENSPIGTQIVKIYANDSDFAGNGNGLILFDLNYQNGAEKQYFAVDSKEGVITTI
AKLDYETKSNHRLIVTASDLGSPVSLTSSAVILVTVLNVDDDDEEADNEVHKMPTFRHRY
YEIEVDENASVPLLIAQLDLTDGHHTDHIRYSVVADGSDSREHFSVDPKNGSLYLMTEID
RETRDRYEVKVRVDRLKLGRGMPVMIYPVVGERLNGLAPNEAKVVVRVKDVNDNAPRFKT
KDRPILAAIPTTAHYGYEVVKVEAEDPDLGINGEIRYQILGREDAPRFAIDPLSGQVRSV
ASFGRDAGRVFGFDVKATDRQGAENGRSSIANVFVYVLDDQKQVVMIMGRKPIEIEPELE
NITIALQNVTGLDVRVRKLEPHIEKNLIDGASTDIYLYAIDPHLNVIIDMETLHSVFNNK
KADIKRELEEYHVLEIAGNAPRKSSQRYLLSTLEVGVVVLGCVVFVGALVTALCVTCVRR
NKRRRRRDKAMFSTVGPVGFALTDPAGTLQKPPLFPTFVDGLHYDPEPFCSEMSRRQSMC
EHGNCVRFHTMGGGGKHAVRSTGTLKGLEASATSLHSSGQDSGIVARTSCHCSHSSSPSS
GESSNGYEDSLKSLQRRERCNDVSRGSHDTSSVVGRRANLAAKRRQRFHSFSNVESVYAH
EMAMQREQQQQQQQQQHCCIGTEKRRKAEHRRSHSEAENNITETVIHEHPGTEISLASSL
PNTSTIHGTISRTSHMLY
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcgaaggagaacgtctacctttccctcgtcgccgccgctgcattcctggctg
atcacggtggttctgttgatcttttccgtccaagttcaccgtgtaacaggatgccagttt
tatcctgtcggggagtatctgaaattcgtcagggtgccggagaatctagaaacaggaact
gaaattctttcgttggaggcacatccgagaaatcgactcgccattacggcggtcgacaag
gaggaggacgccggtttcttcgcttacaaggaaacgaacgagacgcacgtttcactgatt
ctggcacagtctctggaggatctcgtagacgcggaatcgccacggaacctgctaaaattt
cgcgtctcctgcgactcgggctccggtgactcgttggtgtcatcgcatttgtcggtgacg
gtctacgtggaggacataaacgatcacgcgccacaatttgtcgatgcgccttatcacgta
acggtggacgagcttacgccagtcggtgtgacgatatttcgcgggatccacgcgctggat
ggcgacaagccgaacacgccgaacagcgacgtttattacgccatcgtgaaggggaacgag
cagggcaaattttccctcgagtccggacacagaaccgccctaatactccgaaagccggtc
gactacgacagcggagatcgcgagttcaccttggttattactgcgaccgatcgcggtgta
cccgccaggagtacgaacagcaccgtcaagataaccgtcgtggacaacgatgatctcgat
ccgaaattcacgcgggacatctacaaggcgaaaatttatgagttttatcccatgccggag
tacccaatctttatggagatcaatttcaccgatccgatccacgcggctgatcgcgatcgg
gacatcaatgtgccagtacgatacgacataatatccggtaacgaaagaggtttcttccat
ctcgatccgaaaaacggctcgctgtttctaaaacgcgcgatcgatcttgacgccgagcgg
agcttgccggggaatacgtttaatctccagattcacgcgtcgcaagtggacaatccgttg
aagatgaccgtcgcacgggtcgaagtggagatgatggacctaaatgacaatttgccacaa
ttcgaggtcgatttgtacaacattagcatcgtggagaatctaccgaatggcttcagcgtg
ctgcaggtgatcgcgcgcgacaaggatcagggtgagaacggggagtttgattatcagctg
gaggatccagcgggcgccttttccgtggatcgggaatccggttggctcaccgtaaaggat
cagacggttctggaccgtgagaaacgcgatcacctgaagatgaaggtgtacgctgtagag
cacagaccgagcgtcgtcgtaacgagcgaagctggctcgaaaggatcttccgtagacgtc
gagattacccttctcgacgccaacgataacaatcccatcttcgtgcccggcaatctttac
gagctggtggcgagaagcgacgtgaaggtcggcaccgtgttgggtcaggtgcacgcggtg
gacgacgacctgggtcccaacggattggttcgctatcgactgcagaaacctggcaactcc
acgcttcggaaaccgccgttcgcggtggatgagagcacgggtctgatcacggtgtcggag
agcccgatactcgagggtagacacgcgattttcgtggaagcggctgatcagccggcgaat
cccagcgagagaagattttctttagcggttgtcacggtggacgtctttcgtgcggatggt
ccaaattcgtggaaaccagatttcgtcggtgcaccctacgagttctgggtcggtgcgaat
gtacctgtgggtactagcgtcgggcagattcgtctgaatgacgccgtcaaaactaatgac
cttatctacgaccttctgcacggttacgaggaaggagttccatttgccgtggaggagcgc
tcgggtacaataacggtcgtggaggagatcgagcgcttcgaccattccatatacgacttc
gaggcggtcgtcagcgacgagagggaactgacgctgatcacgaacgtttcaatccacgtg
gtagatccaaatgacaacaggggtatccttacgaagggaacgaccaccgctcctctggct
ttccatgtaaaggagaatattcccggcgcattgatcggccaagtgcttccgcagaatggc
acaacggcggctatgtccggcactcagttccttatcgtcaatcagcaggacgtgcccgat
atcgccattatggagaacggttctctttacgctcctcaaggtttggatcgcgagataaga
gagaactacagcatcaccgtgatagccgagagtttacgcggcgtgggcgtgtttcaggtg
cgaatcgtcgtggacgacgaaaacgatcacgcgccggaattcacgttgcccgcttacgaa
ggccggattatggagaacagtcctgcgggaaccgaagttactctgacaaatccgattgcg
gcgagcgataaagacgaaggcgaaaatcgggacttcacgtttgcgctgcagggcgacgat
agcggtctgttcacgatcgattcaataacgggtcgagtgtactttgaaggtatcgacgag
cctctggaccgcgagacaaggtcgagctacgaatttcaagttatcgccactgatagcggc
ggactgaagtcggaaagttctctgaagataacggtgctcgacgcgaacgacaatcctccg
aagttcattcggatgatagtcctgccggatcagggagtgcgagtatcaaataatccgagt
gaggatacatctgctgagatagaggatgaaggaaatcaatccgacaacccggtgggcggc
gggcggcgctcgccgttgctgctggtgccggaaaacacgacgatcggcgtgccgataata
cgtctgctggcggacgacaaggacgagggcgtgaatgcggcaataacgtacagtctaggg
aacgagacgacttccagcggggttcgatcgcgccgttacgatgccaccagtcgtcgttat
ttccacctcgacccgcgcacggctgaaatatccgtggcccggggcttaccgccggaaaag
gacattcggctgttcatcctggcgagggaccccgacggtctcgcggacaacatcaccgtc
aggatccatgtgacggacgtgaacgaccacgcgcccgtctttgacaagtcctggtacacc
tttgatgtggccgagggcagttacaccgattatgctgtcggtacggtgcaggcgctcgac
gccgatttcggtgagaacgccaatctcagctacgagctgataactagccacgaggactcg
aaacgagccggcaacgcctcgcgatcattcgacgtggactcctacgagggaattatacgc
gtgagcgggactctcgatcgagagagagctacgacccatcgtctcctcgtgatcgctcac
gatcaaggctcgccgagtctgagctcctccgtggaggtagagataaatgtattggatgtg
aacgacaacgcaccgacgttccacggctacgatgagctagaggacgatcggttgccggtc
taccgggtctccgtcctggagaacagtccgatcggcacgcagatcgtcaagatatacgcg
aacgacagcgatttcgctggtaacgggaacggactgatcctgttcgatctgaattatcag
aacggcgcggagaaacagtatttcgcggtggacagcaaggagggcgtcatcacgactatc
gccaaactcgattacgagaccaaaagtaatcatcgtttgatcgtcacggcgagcgatctc
ggctcgccggtaagtttgacctcctcggctgtgattctcgttacggtgttgaacgtcgac
gatgacgacgaggaggcggacaacgaggtgcataagatgccaaccttccggcatcgatat
tacgagatagaagttgacgagaacgcttccgtgccgttgttgattgcgcaactcgatctc
accgatggtcaccatacggatcacataaggtacagcgttgtggctgatggttccgacagt
agggagcatttttccgtcgatcctaaaaacggttctctctacctgatgacggagatcgat
cgggagaccagagatcggtacgaggtgaaggtcagagtcgatcgactgaagctcggccgt
ggcatgccggttatgatctatccagtcgtcggtgagaggctgaatggactggcacctaac
gaagccaaagtggtcgtcagagtgaaggacgtgaatgacaacgcgcccagattcaagaca
aaggacaggcccatcctcgccgctatacccaccactgctcattacggttacgaggtcgtc
aaagtggaggccgaggatccggatttggggataaatggtgaaatacgctatcaaattctt
ggccgggaggacgccccgcgtttcgccattgacccacttagcggtcaagtgcgatcggtg
gcgagttttggccgcgacgccggtcgcgtcttcggcttcgacgtcaaggccactgacaga
cagggcgccgagaacgggcgcagcagcatcgccaacgtcttcgtgtacgtgttggacgat
cagaaacaagtcgtcatgatcatgggtcggaagcccatcgagatcgagccggagctcgag
aacattactatcgcgttgcagaatgtcaccggcttagacgtgcgagtgagaaagctggaa
cctcacatcgaaaagaacttgatcgacggtgcctctaccgatatttatttatacgcgatc
gacccacatttgaatgttataatagacatggaaactttgcacagtgtttttaataacaag
aaggcggatataaaacgcgaactggaggaatatcacgtactggaaattgctgggaacgcc
ccacgtaaaagtagtcaacgttacttgttgtccaccctcgaagtgggcgttgtggtgctc
ggctgtgtcgtcttcgtgggcgcccttgtgactgccctgtgtgttacctgtgttcgtcgc
aataaacgtcgtagacgacgagacaaggccatgttctcgacagtcggcccggtcggattt
gctttgacggaccctgccggcactctgcaaaagccaccactctttcccactttcgtcgat
ggtctccattacgatcctgaacccttctgctcggagatgtccaggaggcagagcatgtgc
gagcacggcaattgcgtccgctttcacacgatgggcggaggcggaaaacacgcggtgagg
tcgacgggtaccttgaaaggtctcgaggcatccgcgacatccctgcattccagtggtcag
gactctggtatcgtggcgcgcacctcttgtcattgcagtcactcatccagtccttccagt
ggcgagagtagcaacgggtacgaagattcgctcaagtctcttcagcgtcgcgagaggtgc
aatgacgtctcgcgtggcagccatgacacctccagtgtggtcggcagacgtgcaaatctg
gcggcgaaacggcgacagcggttccactccttctcgaacgtcgaatccgtttacgctcac
gagatggccatgcagcgagaacagcagcagcagcagcagcagcagcagcactgctgcatc
ggcaccgagaagagacggaaagcggagcatcgccgttctcattccgaggcggaaaataat
atcaccgagacggtgatacacgaacatccgggcaccgagatatcgttagcgagctccctg
ccaaacacatcgactattcatggtactatatcaagaaccagccacatgctctactaa
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integrated database retrieval system
