Pogonomyrmex barbatus (red harvester ant): 105434258
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Entry
105434258 CDS
T04903
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pbar04515
]
105434258
Cell adhesion molecules [BR:
pbar04515
]
Cadherins
Cadherin related
105434258
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
105434258
NCBI-ProteinID:
XP_011648229
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MLPQGTTGALLYGLLALLCVGLTHASIAAAFESTPSSSFGNDHGAPRLDLESLESGYHGL
VKENETLVEVTPQIRALGTKVCSFRIANKHHGEAPFEIVLKEKGMAELRAFRVLNCEKRR
NYKFDIAAVGCNGAQSENATVHITVVDVNEYAPQFLQPAYVSTVDEGRLYEEVVRVEASD
RDCTPKFGDVCKYEILTADQPFIIDNEGAIRNTEPLDYERSHNYILSVVAYDCGMKQSAP
AMVTVKVNRVCAPGWRGIPERVDYAAGVGSQPLLPSARLDLCDAPCILRNVRATLTLATD
HIGKGCDRDTYGVRSQRKLCGASRDSVDLLPTPGPTTSWTAILSRDEGREADEIFEFDGV
DSAAIVPNDVLEHSLAQKFTIGVWVKHRPRPRQDPHVKEHILCAADDHSEFSCDDKWHHY
AIQVDFPRVNLYVDGEEWRADEKNPEVIDDWPLHPAKGVNTTLVVGACWQGSENKTKHHF
RGYLAGLSVLVGRNEKPEVLSCLRRCQEGIHVPPMDLLQPGTQLLTNSDMTEVRIDGDNR
TNVEILLRRIGYSNTRRFPTPGRRNFRLDTTIVCEGSENTPLPVPTVQSYVTVLPPPRPG
ITVNGTGYVAREYADFRLGVRVFPDARVTAGSAARLDACAVSVYPSLNPDHESLGLPGDA
LLAFHDISARVDRDGVVLSGADSPYNYQQLIRLIMYTNRKPAYYLDRVFKLTCSELSGRF
ASNEYVQTLAVIHPKEKTTVLPHTTPGEPPIARIVEPAPGHAQLSPHHADLTEEYATAAL
REGSRTIGSTGGSHAVTIVAAACIGFLLLMAVVGAARVRGAAKRRRSAGDELAAETEMAW
DDSALAITVNPMERLTEHDQHHQSQRDEDADDSGSSDSEDGSFRDDDLDSSDCENDCDLS
NGRHRRHNSPHDLEWDHRDV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcaggggacgacgggcgcgctgctctacggcctgctggccctgctgtgcgtc
gggctcacccacgcgagcatcgctgcggccttcgagtcgacaccttcgagttctttcggc
aacgatcatggagctccacgactggacttggagagcctcgagagtggataccacggcctg
gtcaaggagaacgaaactctggtcgaggtcacgccgcagatccgcgccttgggaacgaaa
gtttgctccttccgcatcgcgaacaagcaccacggcgaggcgccgttcgagatcgttctg
aaagagaaggggatggccgagctgcgggcgttccgggtcctgaattgcgagaagcgccgt
aattacaagttcgacattgccgcggtcggctgcaacggagcgcaatccgaaaacgccacg
gttcatattactgtggttgacgtcaacgagtacgcgccgcagttcctccaaccggcctat
gtcagcaccgtggacgaaggtcgcctgtacgaggaagtggtccgcgtcgaggcgtccgac
cgggactgcacccccaagttcggtgacgtctgcaagtacgagatcctcactgccgatcag
ccgttcatcatcgataacgagggtgccatccgcaataccgagcccttggactacgaacgt
tcgcacaactacatactcagcgtggtcgcctacgactgcggcatgaaacagtcggcgccg
gcgatggtgacggtcaaggtgaaccgcgtgtgcgctcccggatggcgaggcatccctgag
agggtagattacgccgccggcgtcggctcgcaacccctgttgccctcggcgcgacttgac
ctctgcgacgcaccctgcatcctgcggaatgtgcgtgccactctgactttggccaccgat
cacattggcaagggttgcgatcgcgacacctacggggtgcgcagccagcggaaactgtgc
ggcgcctcgcgcgacagcgtggacctactgcccacacctggacccacgacctcctggacg
gccatcctttccagagacgagggtagagaagctgatgagatcttcgagtttgacggcgtg
gactcggccgcgatcgtaccgaacgacgttctggagcacagcctggcgcaaaagttcacc
atcggcgtctgggtcaagcaccggccacgcccgcgacaggatccccacgtcaaggaacat
atcctatgcgctgccgacgatcacagtgagttttcatgtgacgataagtggcatcattac
gcgatccaggtggatttcccgcgcgtcaatctgtacgtggatggcgaggagtggcgcgct
gacgagaagaatcccgaagtcatcgacgattggcctttacacccggccaagggcgtcaac
accaccctcgtggtcggagcgtgctggcagggctctgaaaataagaccaaacatcatttc
cgcggctatctcgccggtctgtccgtcctagtcggccgaaacgaaaaaccggaggtcctc
tcgtgtctgcgccgctgccaggaaggcattcacgtgccacctatggacttgttgcaaccg
ggtactcagctgctgaccaattccgatatgactgaggtacgcatcgatggcgacaatcgc
acaaatgtggaaatcctgctgcgtcgtatcggctactccaacactcgacgtttcccgacg
cccggccgccgtaacttccgtctcgacacaacgatcgtctgcgagggtagcgagaacacg
cccctaccggtaccaaccgtgcagtcttacgtcaccgttctaccgcctcctcgaccgggc
atcaccgtcaacggcaccggctacgtggcccgcgaatatgcagatttccggctgggagtg
cgtgtattccccgatgcgcgtgtcaccgctgggtcggccgcccgattagacgcttgcgct
gtcagcgtttatccgagcctcaatcctgatcatgagagtctgggattacccggcgatgct
ctgctcgcgttccacgatatctccgctcgtgtcgatcgggatggcgttgttctctcgggc
gcagattcaccctacaattatcaacagctcatccgtcttataatgtacacgaatcgcaag
ccggcttactacctagatcgcgttttcaagcttacttgctccgagttgagcggccgcttc
gccagcaatgagtacgtgcaaacgttagctgtgattcatcctaaagagaagacaactgtc
ctgccgcatacgacgcccggagaaccgcctattgccagaattgtcgagccggcaccgggt
cacgcgcaactctcgccgcatcacgccgatctaacggaagaatacgccacagccgcgctt
cgtgaaggcagcagaactatcggcagcactggcggcagtcatgcagtgaccatcgtcgcc
gccgcttgcatcggcttcctgctgctgatggcggtggtaggtgctgcgcgagtccgcgga
gcggctaaacgacgacgatccgccggtgacgagctcgcggccgagacggagatggcctgg
gatgactcggctctcgccattactgtaaatccgatggaaaggttgacggaacacgatcag
catcatcagagccagcgggacgaggacgcggacgattctggcagctccgactccgaggat
ggctcgttccgggatgacgacctcgacagctctgactgcgagaacgattgcgatctcagc
aacggccggcaccgccgtcacaattcgccgcacgatctggagtgggatcatcgtgacgtt
taa
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