Pseudomonadaceae bacterium T75: OS670_19785
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Entry
OS670_19785 CDS
T08742
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau03410
Base excision repair
pbau03430
Mismatch repair
pbau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OS670_19785 (recJ)
03430 Mismatch repair
OS670_19785 (recJ)
03440 Homologous recombination
OS670_19785 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbau03400
]
OS670_19785 (recJ)
DNA repair and recombination proteins [BR:
pbau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OS670_19785 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OS670_19785 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OS670_19785 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WAD26612
LinkDB
All DBs
Position
4227111..4228826
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AA seq
571 aa
AA seq
DB search
MRIEPRPLPATLPDLGDLPPLLTRLYAARGVQSAVELDKGLARLIPYGQLKGIEAAVELL
VAALERRQRILFVGDFDADGATASTVGVLGLRQLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRQPDLLVTVDNGISSVEGVAAAKVAGLQVLVTDHHLPGPELPAADAIVNPNQPECTF
PSKCIAGVGVIFYVLLALRARLRELGWFARNGWAEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRAILEVAGRDHKRITSTDLGFILGPRLNAAGRLDDMALGI
ECLLCEDEALARDMAVQLDQLNQDRKGIEQGMQREALAQLKDLSLDDMPFGLCLFEPDWH
QGVIGILASRLKERYHRPTIAFADAGEGLLKGSARSVPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFAVAFDAEVRRQLCEDDLTGRLLTDGQLGVEEFHLELARALR
NAGPWGQHFPEPMFHGVFQLVQQRLVGEKHLKMVLKSECGALTIDGIAFNIDRETWPNPN
VRWADLAYKLDVNEFRGRESVQLLVAHIAAR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatagaaccccgtccattgcccgcgaccctgcccgacctgggcgatctgccgccg
ctgctgacacgcctgtatgcggcgcgtggcgtgcaatcggcagtggagttggacaagggg
ctggcgcggctgattccttacggtcagctcaagggcatcgaggcggcggtcgaactcctg
gtcgcggctttggagcggcgtcagcgcatcctcttcgtcggcgacttcgatgccgacggt
gctaccgccagtacggtgggcgtgctgggtttgcgtcagctcggcgccgcgcatgtggat
tatctggtacccaaccgtttcgaatatggctatggcctgacgcccgagatcgttgccgtg
gccttgcagcgccagccggatctactcgtgaccgtggataacggcatctccagcgtcgag
ggcgtcgcggcggccaaggttgccgggctccaggtcctggtgaccgaccatcacctgccg
ggtccggagctgccggcagccgatgcgatcgtcaatccgaaccagcccgaatgcaccttt
cccagcaagtgcatcgccggcgttggggtgattttctatgtgctgctggccttgcgcgcc
cggttgcgcgagctgggctggttcgcccgtaacggctgggccgagccgaacctggccgaa
ctgctggacctggtggcgctgggcagcgtcgccgatgtggtgccgctggacgccaacaac
cggatcctggtgcaccagggactggcgcggattcgtgcggggcgagcgcggcccggcttg
cgtgcgatcctcgaagtagccggtcgcgaccacaagcgcatcacctcgaccgatctgggc
ttcatactcgggccaaggctgaacgcggcggggcgcctggacgacatggcgctgggcatc
gagtgcctgctctgcgaggacgaggcgctggcgcgcgacatggcggtgcagctcgaccag
ctcaaccaggaccgcaagggcatcgagcagggcatgcagcgcgaagccctggcgcagctc
aaggacctgtcgctggacgacatgccgttcgggctctgcctgttcgagccggactggcat
cagggtgtcatcggcatcctcgcttcgcgcctcaaggagcgctatcaccggccgaccatc
gcctttgccgatgccggcgaaggcctgctgaagggatcggcgcgctcggtgccgggcttt
catatccgcgatgcgctggatgccgtggcggcacgtcatccggggttgatcagcaagttc
ggcgggcatgcgatggcggcgggcctgtcgctgccgcaggagaatttcggcgccttcgcc
gtggcgttcgacgccgaggtgcgtcgccagctgtgtgaggacgatcttaccggccgcttg
ctcaccgacggtcagctcggcgtcgaggaattccatctcgagctggccagggcgctgcgc
aacgccgggccctgggggcaacattttcctgagccgatgtttcacggcgtgttccagctg
gtgcagcagcgcctggtgggcgaaaagcatctgaaaatggtgctcaagagcgaatgcggc
gcgctgacgattgatggcatcgctttcaatatcgaccgtgaaacctggcccaatcccaat
gtgcgctgggccgatctggcctacaagctggacgtcaacgaattccgcggtcgggagagc
gtgcagttgctggtggcgcatatcgctgcgcgttga
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