Pseudomonas brassicacearum DF41: CD58_10740
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Entry
CD58_10740 CDS
T03174
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbc03032
]
CD58_10740 (ihfA)
03036 Chromosome and associated proteins [BR:
pbc03036
]
CD58_10740 (ihfA)
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_10740 (ihfA)
DNA replication proteins [BR:
pbc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CD58_10740 (ihfA)
Chromosome and associated proteins [BR:
pbc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CD58_10740 (ihfA)
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CD58_10740 (ihfA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Meth_synt_1
SNF5
Motif
Other DBs
NCBI-ProteinID:
AHL33342
UniProt:
W8PQQ4
LinkDB
All DBs
Position
2354092..2354394
Genome browser
AA seq
100 aa
AA seq
DB search
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctgacgaaagctgagatggcggaacgtctgtatgaggagttgggcctgaat
aaacgggaggccaaagaattggtcgaactgttttttgaagaaatcaggcacgctctggaa
gacaacgaacaggtcaaattgtccggtttcggcaatttcgaccttcgggacaaacgccag
cggcctggccgcaatccgaaaacgggagaagaaatcccgatcacggctcgccgtgtggtc
acctttcgtccagggcagaagttgaaggcccgagttgaggcttatgctggaaccaagtca
taa
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