Pseudomonas brassicacearum DF41: CD58_27685 Help Entry CD58_27685        CDS       T03174                                  Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pbc  Pseudomonas brassicacearum DF41 Pathway pbc03030   DNA replication pbc03410   Base excision repair pbc03420   Nucleotide excision repair pbc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pbc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CD58_27685    03410 Base excision repair     CD58_27685    03420 Nucleotide excision repair     CD58_27685    03430 Mismatch repair     CD58_27685  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pbc03032]     CD58_27685    03400 DNA repair and recombination proteins [BR:pbc03400]     CD58_27685 Enzymes [BR:pbc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CD58_27685 DNA replication proteins [BR:pbc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CD58_27685 DNA repair and recombination proteins [BR:pbc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CD58_27685    NER (nucleotide excision repair)     GGR (global genome repair) factors      CD58_27685    MMR (mismatch excision repair)     DNA ligase      CD58_27685   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CD58_27685 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_5 RNA_ligase Motif Other DBs NCBI-ProteinID:  AHL36418 UniProt:  W8PR66 LinkDB All DBs Position 6190931..6192604 Genome browser AA seq 557 aa AA seqDB search MLPLLRALSCFVLLTPPVFAAPCPDWPTERAQAEIIALQRQIDSWDDSYHRLGRSLVADE LYDQSRTQLGRWRRCFSLEAPGNPLLTAGGKIPHPVVHTGLDKLKDADAVEAWLQNRKDV WAQPKVDGVAVTLIYREGHLQQAISRGDGVQGHDWTPNARKIGAIPQRLRQPRDLVVQGE LYWRLLTHVQASSGSLNARGTVTGLMARTNMTAQEAADIGLFVWDWPEGPTTLPERMAAL SELGFADTLHYNQPVQVLADAEHWRDHWYRTPLPFASDGIVLRQSRRPPADRWQARAPFW SVAWKYPYAQALAEVRKVRFKIGRTGRITPVLELEPVMLDDRRIRRVSVSSLKRWEEMDI RPGDQVAISLAGLTIPRLDSVVLRSIERQDLNAPAAADYHFLSCWQPTPGCESQFLARLD WLSGKHGLALPHVGPGTWKKLLAAGRLDGLLDWLTLDAAELANIAGFGEYSSARLLASLH SARQRPFEQWLKALGLPPTGEARLEGPWQALAERDTEQWQAEAGIGPGRAAQLSAFFRDP QVLALSEILRTAGVDGF NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atgctgccgttattacgtgccctcagctgttttgtcctcctcacacctcctgtcttcgca gcgccctgccccgattggcccaccgaacgcgcccaggcagagatcatcgccctgcaacgg caaatcgacagctgggacgacagttatcaccgactgggtcgctccctggttgccgatgaa ctttatgatcagtcccgcacacaactgggccgatggcgccgttgctttagcctcgaggcg cccggcaatcccttgctcacggcgggcgggaagataccgcacccggttgttcataccggt ctggataaactcaaggatgccgacgccgtggaggcctggttgcaaaatcgcaaggacgtc tgggcgcaaccgaaagtcgacggcgtggcggtgaccttgatctatcgcgaaggacacctg cagcaggcaatcagccgtggcgacggcgtgcaaggacacgactggaccccgaatgcgcgc aaaatcggcgccatcccccaacggttgcgccagcctcgggacctggtcgtccagggcgag ttgtactggcggttgctcactcatgtccaggccagcagcggcagtctcaacgcccgggga accgtgacaggcctgatggcccgcacgaatatgacggcgcaggaggcggcggacattggc ctgtttgtctgggactggcctgaagggccgaccaccctgcccgaacggatggccgcgctg agtgagctgggcttcgctgacacgctccattacaaccagcctgtccaggttctggccgat gccgagcactggcgcgaccactggtatcgcacgccgctgccattcgccagcgacggtatt gtcctgcgccagagccgccgcccacccgccgaccgctggcaggccagggcgccgttctgg agcgtggcctggaaatacccctatgcccaagccttggccgaagtgcgcaaggtgcgcttc aagatcggtcgtaccgggcgcatcacgcccgtattggaactcgagccggtcatgctcgat gaccggcgaatccgtcgggtgagcgtcagttccctcaagcgttgggaggagatggacatc cgtcctggcgaccaggtcgccatcagcctggccggactgaccattccacgcctcgacagc gtcgtgctgcgcagcatcgagcggcaggacctcaacgcccctgcggcagccgattatcac ttcttgagttgctggcaaccgacccccggctgcgaaagccagttcctcgcgcgcctggat tggctcagcggcaaacacgggctcgccctgccccatgtcggcccgggcacctggaaaaaa ctcctggccgccggtcgactcgacggattactggattggttgaccctcgatgccgccgag cttgctaacattgctggcttcggtgaatacagcagcgctcgcctgctcgccagtttgcac agtgcccggcagcgcccgttcgaacaatggctcaaggccctcggcctgccgcccaccgga gaggcccggctagaggggccgtggcaggcgttggccgagcgcgacaccgaacaatggcaa gccgaagctggcatcggaccgggacgcgccgcgcaattgagcgcttttttccgcgacccg caggtgctggctttgagtgaaatattacgcactgccggggtcgatggtttttga

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