Prionailurus bengalensis (leopard cat): 122481854
Help
Entry
122481854 CDS
T07574
Name
(RefSeq) collagen alpha-3(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04151
PI3K-Akt signaling pathway
pbg04510
Focal adhesion
pbg04512
ECM-receptor interaction
pbg04820
Cytoskeleton in muscle cells
pbg04926
Relaxin signaling pathway
pbg04933
AGE-RAGE signaling pathway in diabetic complications
pbg04974
Protein digestion and absorption
pbg05146
Amoebiasis
pbg05165
Human papillomavirus infection
pbg05200
Pathways in cancer
pbg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122481854
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122481854
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122481854
09142 Cell motility
04820 Cytoskeleton in muscle cells
122481854
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122481854
09154 Digestive system
04974 Protein digestion and absorption
122481854
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122481854
09162 Cancer: specific types
05222 Small cell lung cancer
122481854
09172 Infectious disease: viral
05165 Human papillomavirus infection
122481854
09174 Infectious disease: parasitic
05146 Amoebiasis
122481854
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122481854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbg04147
]
122481854
00536 Glycosaminoglycan binding proteins [BR:
pbg00536
]
122481854
Exosome [BR:
pbg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122481854
Glycosaminoglycan binding proteins [BR:
pbg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122481854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122481854
NCBI-ProteinID:
XP_043433948
LinkDB
All DBs
Position
C1:211235594..211375754
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPGTARRPPALLLQLLLVLLAAAPTTGKGCVCKDKGQCFCDGIKGEKGEKGFPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGGRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGEQGFPGLPGIPGYPGIPGAVGLKGEKGAPAAEGIELDGRGDPGLPGAPGL
QGLPGLPGFPGPVGPPGPPGLFGFPGTMGPPGPKGHMGDNVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTQDLKGEKGDKGDMGKSGPPGPSGPPGESYGAEKGAPGEPGPQGKPG
KDGTPGFPGTEGAKGNRGFPGLPGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDVGIPG
PPGPKGARGPQGPSGPPGVPGSAGSSRPGLRGAPGFPGVKGRKGERGPPGKNAVGPPGSP
GCPGAPGPTGSPGYPGPPGDIIFRKGPPGDSGLPGPIGFPGIPGVDGPKGEPGLLCIQCP
CVPGPPGLPGLPGLDGVKGIPGGQGPAGSKGSPGSPGSAGLPGYPGFPGAQGDPGLKGEK
GEAPQPDGQVGAPGDPGLKGHPGRRGLDGIPGTPGVKGSPGPKGEPALTGEKGDQGPPGD
PGTPGPPGPAGPPGPPDYGPQGEPGPKGTQGIPGAPGPPGEAGPKGEFSVSTPVPGPPGP
PGLPGRAGPQGPPGIPGSIGKCYPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGAKGSPG
CPGEMGKPGSPGEPGLPGAKGEPGLALPGEPGTPGFPGERGNSGKNGEIGLPGHPGLPGI
PGTRGLDGPQGDPGKAGPPGEKGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEVGPPGQKGYPGNPGFLGPPGEKGTTGMMGYPGHIG
PPGPPGNPGTPGQRGDFGIPGAKGEKGPPGAQGEEGDKGPQGPSGISHLLGDKGEPGLKG
FAGKPGEKGNSGVPGLPGLKGLQGPPGPPGPPGPRGDPGNIGNPGAPGPRGVPGSMGIMG
VPGPKGHRGALGLPGLTGRPGLPGVHGLQGEKGEPGYSAGARPGSPGPKGDPGFPGDMGR
KGERGVPGAPGHSGPAGPEGAPGNPGSPGHPGKPGPDGDLGLKGIKGFPGPPGVKGPPGP
PGFPGPPGPMGMRGNQGRDGIPGPAGEKGETGLLKAVPGPRGSPGVPGAKGDRGAPGLPG
LPGRKGIVGDAGPWGPTGMTGLPGPPGFPGAVIPGQKGNRGPPGFRGNPGDPGPPGPPGS
HVRGLKGDKGLLGKPGPRGPPGTVGDEGPPGQPGAPGAPGLPGLRGDPGFHGFPGVKGEK
GNPGFLGPVGPPGQIGPKGPPGIRGDPGTVKIISLPGSPGPPGPVGEPGMQGEPGPPGPP
GILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEQGPPGLDGLPGLKGKPGDIGPPTTA
TAMRGFIFTRHSQTTAIPSCPEGTQPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPAMAIAI
HSQTTDIPSCPHGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPKRMFRKPIPSTMKAGELEKIISRCRVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgggacggcgcggaggccgcccgcgctgctgctgcagctcctgctggtgctc
ctggcggcggcgcccacgacaggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatgggatcaaaggagagaagggggagaaaggctttcctggacccgctggttctcct
ggccagaaggggttcccaggtcccgaaggcttgcctggaccgcagggacccaagggctca
ccaggacttccaggactcaccggtcccaaaggtggaaggggaataactggattgccagga
ttctcaggtcctcctggacttccaggcaccccgggccatcctggaccatatggacctgct
ggtgtaccagggtgcaatggttctaagggtgagcaagggtttccaggccttccggggata
ccaggctacccggggatcccgggtgctgttggcttgaaaggagaaaagggagctcctgct
gcagaaggtatagaacttgatggaagaggtgaccccgggttgccaggagccccaggatta
cagggcttaccaggccttccaggttttcctggacccgttggtccacctggccctccaggg
ctctttggctttccaggaaccatgggacctccgggacctaagggtcacatgggcgataat
gtgataggacaaaaaggagagcggggtgtgaaaggattgacaggaccccctggaccacca
ggaacggttattgtgacgctaaccggcccagataacagaacgcaggacctcaagggagag
aaaggggacaagggagacatgggcaaatccggacctcctggaccctcaggaccgcctggg
gaatcttatggagctgaaaaaggtgctcctggagaacctggcccgcagggaaaacctgga
aaagatggaacccctggtttccctggcactgagggagccaaaggcaacaggggcttccct
gggttaccaggtgaagacggcattaaggggtggaaaggggacattggccctccaggattc
cgtggtccaacagaatattatgatgcataccaggaaaaaggggatgtaggaattccaggc
ccaccaggccccaaaggagctcgtggcccacagggtcccagtggtcctcctggagttcct
ggaagtgctgggtcgtcgaggcctggcctcagaggagcccctggattcccaggcgtgaaa
ggaaggaaaggggaaagaggacccccgggaaagaatgcagtggggcctcctgggtccccg
ggttgtcctggggcaccaggccccacagggtcgccgggatacccaggaccaccaggtgac
atcatttttcgcaaaggtccacctggagatagtggacttccaggccctatagggtttcca
ggaatcccaggagttgatgggcccaaaggggaaccaggcctcctgtgcatccagtgtcct
tgtgtcccagggcctccgggcctcccaggattgccggggttagatggcgtgaaaggaatc
ccaggcggacaagggccagctggcagtaaaggaagcccagggtccccaggaagtgcgggt
cttcccggatatccagggttcccgggtgctcagggggatccaggacttaaaggagaaaaa
ggggaagcacctcaacctgatggacaagtgggtgccccaggggaccctgggctcaaaggg
catcctggaagaagaggcttggatgggattcctggaacccccggggtaaaaggatcacca
ggacctaaaggggaaccggccctgactggtgagaagggggaccagggtcctccaggggat
cctggcacccctgggcccccgggacctgcaggaccacctggaccaccagactatggacct
cagggagagcctggtccaaagggtacccaaggaattcctggagcccccggaccacctgga
gaagccggtcctaagggagaattcagtgtttcgacaccagtaccagggcccccaggacct
ccagggctccctggccgtgctggcccccaaggtccgcctggtatccctggatccatagga
aaatgttatccgggtcttcctgggcctgatggtgaaccagggattccaggaattggcttc
cctgggcccccaggacctaagggagaccaaggttttccaggagcaaaaggatcaccaggt
tgtccaggagaaatgggaaagcctgggtcacctggagaaccaggtctccccggagccaag
ggagagccgggactagccttgcctggagaaccaggaacgccaggttttccgggagaaaga
ggcaattctgggaaaaatggagaaattggactccctggacatccaggtctccctgggatt
ccaggaaccagagggcttgatggaccacaaggggatccagggaaggctggaccacctgga
gaaaaaggacccccaggaaggtgcatagagggtccgaggggagcccaaggacttccagga
ttaaatggattgaaaggtcaacaaggcagaagaggtgaaacggggccaaagggagaccca
ggtattccaggcttggataggtcaggctttcctggagaacccggaccaccagggatgcca
ggtcatcgaggtgaggtgggaccacctggtcaaaaaggatatccaggaaatccaggattt
ttaggaccaccaggtgaaaaaggaacgactggcatgatgggctatccaggacacattggt
cctccggggcctcccggaaacccaggaacgccaggacagaggggtgactttggaatccca
ggagcaaagggtgagaaagggcccccaggagcccagggtgaagaaggagacaaaggaccc
caggggccttctggaatatcccacctactgggggacaaaggagaaccaggcctcaaagga
tttgcagggaagccgggtgagaaaggaaacagtggtgttccagggttaccgggtttaaaa
ggactccaagggccacctggaccaccaggaccaccaggccccagaggagatccaggcaac
attgggaatcccggggcaccaggaccacgtggtgtgccaggaagcatggggatcatgggg
gtgccaggtcctaaaggacacaggggagctttgggactaccaggtttaactggaaggcca
ggcctcccaggtgttcacggtctccaaggagagaagggagagccgggttattcagcaggt
gcaaggccaggatcaccgggaccaaagggcgatccaggatttccaggtgacatgggaagg
aaaggagaaagaggggtacctggagcacctggacattcggggcctgctggacctgaggga
gcccctggaaaccccggaagtcctggtcacccaggaaagccgggccctgatggtgatttg
gggttaaaaggcattaaaggcttccccggtcctccaggagtaaaaggccctccaggacct
ccaggatttccaggacctcccggaccaatggggatgcgaggcaaccagggacgtgatgga
atccctggcccagcaggagaaaagggagaaacaggtttgctgaaagcagttccaggcccc
agagggagccctggagttccaggagccaaaggagacaggggagccccaggcttacctggc
ctccccggcaggaaagggatagtgggagatgccgggccgtggggacccaccggcatgacg
ggactcccaggaccaccgggttttcctggtgcagtcatccctggccagaaaggaaatcga
ggtccaccaggcttcagaggaaacccaggtgaccctggtcctccgggacctccagggagt
cacgtgagaggcttgaaaggagacaaggggcttctgggcaagcctggccctagaggtcca
cctggaactgtaggagatgaggggccaccgggtcagccgggagcaccaggtgccccaggt
ctgccagggctcagaggtgatccgggattccatggatttccaggtgtaaaaggggagaag
ggtaatccaggatttctgggaccagttggacctccagggcaaattgggccaaaaggacca
cccggtatacgtggagaccctggcacagttaagatcatctccctcccgggaagcccgggg
ccacctggacctgttggagaaccagggatgcaaggagagcctgggccaccggggccacca
ggaatcctaggaccctgtgggccaagaggtaaaccaggcaaggatggaaggccgggaact
cctgggccaattggagaaaaaggcaacaaaggctgtaaaggagagcaaggaccccctggt
ttggatggactgccaggcttgaagggcaaacctggagacattggaccacccacaactgca
acagccatgagaggcttcatcttcaccaggcacagtcagactacagccatcccttcctgc
ccagaaggcacacagccgctctatagtgggttctctcttctttttgtacaaggaaatgaa
caagcccacggacaagacctgggaacccttggcagctgcctgcagcgatttaccacaatg
ccattcttgttctgtaacatcaatgacgtatgcaattttgcatctcgaaatgactattca
tactggctgtcaacaccagctctgatgccaatggacatggctccaattactggcagggcc
ctggagccttatattagcagatgcaccgtctgtgaaggtcctgcgatggccatagctatc
cacagccaaaccactgacattccctcctgtcctcacggctggatttctctctggaaagga
ttctcttttatcatgttcacaagtgcaggttctgagggcgcaggtcaggctctggcatcc
cccgggtcctgtctggaagaattccgagccagtccatttatagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggttggcttcattaaaccccaaaaga
atgttcagaaaacctattccatcaactatgaaagctggggagttagaaaagataataagt
cgctgtcgggtgtgcatgaagagaagacagtga
DBGET
integrated database retrieval system
