Python bivittatus (Burmese python): 103050660
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Entry
103050660 CDS
T03091
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103050660 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbi03400
]
103050660 (LIG3)
Enzymes [BR:
pbi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103050660 (LIG3)
DNA repair and recombination proteins [BR:
pbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103050660 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103050660
NCBI-ProteinID:
XP_007436225
UniProt:
A0A9F2WH09
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MPSLFAGSLCCIKLSKGNCMLLSLRAFLKAARTLSRSEKLALLPKKTRSHTGVFRFQNTG
ALPLTSLWYHQPGVSSFPLPAALHACHLTPLCTASEMAEQRYCVDYAKRGTAGCKKCKEK
ILKGMVRIGKVVPNPFTESGGDMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQE
GEKEMINQHISELSSKTANTPKKKAIIQAKISPGGQITSPKKMPLVSSDPSPKKFSGFTA
KAGTSEEIATSGSSHKPSLSAEKSDPKHKDCLLREFRKLCAMVADKSSYNVKTQIIQDFL
QKGSSGDGFRGDLYLTVKLLLPGVIKSVYNLNDKQIIKLFSRIFSCSQEDMVRDLEQGDV
SETVRIFFEQSRSCPPAAKSLLTIQEVDEFLTQLSKLSKEEEQQNLLQEIALRCTANDLK
CIIRLIKHDLKMNAGAKHVLDALDPNAFEAFKASRNLHDVVERVLKNQQESQPGMKKILS
VQAALMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKKGDHFSYFSRSLKP
VLPHKVAHFKDFIPKAFPGGHSMILDAEVLLIDTRIGKPLPFGTLGVHKKAAFQDANVCL
FVFDCIYFNDVSLMDRPLRERRRFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIRE
GLEGLVLKDVKSIYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFL
MGCYDPDSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPDWLKINKNYYPDFI
VPDPKEAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWTTSTTLPQLRELYQLS
KEKSDFLVVAAEEENSTAGSSGETEGQPKSSSPQKAAKQHSGKSPAKAKKPEVSKPVERS
PLKKTEGKRGEKRKAPELEADKRKQMLLDIFTGVKLYLPPSVEGFGKLKRYFIAYNGDLV
QEYDATSATHVMERMEDNPTAKHVSPEWIWECIRKRRLVTPC
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctctcttcgcgggatctctctgctgcatcaaactaagcaaaggaaattgcatg
ctactttctctcagagcttttctgaaggcagccaggacccttagcagaagtgagaaattg
gccttgctgccaaagaagacacgcagtcacaccggtgtgttcagattccaaaacacgggt
gccttgcctttgaccagcctgtggtaccaccaacccggcgtctctagctttcccctccca
gcagctttgcatgcttgtcatctgacgcccctgtgcaccgcctctgagatggcagagcag
cggtactgcgtggactatgccaagcgaggcaccgctggctgcaagaagtgcaaagagaag
attctcaaggggatggtacgcattggaaaagtggtgcccaatcccttcactgaatctggt
ggagacatgaaggagtggtatcatgtcaagtgcatatttgagaaactggagagggctcgg
gccacaacaaagaagattgaagatatcacagatctggaaggctgggaggaactgcaggag
ggtgaaaaggagatgatcaatcagcacatctcagaactttcttccaaaactgcaaacact
ccaaagaaaaaggccatcatccaggcaaagatttctcctggtggacaaataacgtcaccc
aagaaaatgcctctggtttcttcagatccttcgccaaagaaattttcaggttttacagca
aaggcaggcacttctgaggaaatagctacctctggctcttcccacaagccaagcttgtcc
gccgagaagagtgatccaaaacacaaagactgtttgctgcgggaattcaggaagctgtgt
gcgatggtggctgacaaatccagttacaatgtcaaaactcagataattcaggactttttg
cagaagggaagcagtggagatggctttcgtggtgatctctacctaacagtaaagttactt
ttgcccggagtcattaagagtgtttacaacttgaatgacaaacagatcatcaagctcttc
agtaggatattcagctgcagccaggaagacatggttcgagacctggagcagggtgatgtt
tcggaaacggtgcggatcttttttgagcaaagcaggtcttgccctcctgctgccaagagc
cttttgacaatccaggaagttgatgagttcctgacgcagttatccaaactttccaaagaa
gaggagcaacaaaacctactgcaagagattgcactgaggtgcaccgctaatgacctgaag
tgcatcattcggctgattaagcacgacttgaaaatgaacgctggcgcgaagcatgtactt
gatgcattggaccccaatgcttttgaggctttcaaagcatcccgtaacctccatgacgtg
gtggagcgagtgctgaaaaaccagcaagagtctcagccaggcatgaagaaaattcttagt
gtccaggcagccctgatgaccccagttcagcccatgctggccgaagcttgcaaatctatt
gagtatgccatgaaaaagtgtcccaatggcatgtatgcagaaattaagtatgatggagag
cgtgtccaagtgcacaaaaagggagatcatttcagctatttcagccgcagtctgaaacca
gttctccctcacaaggtggctcattttaaggacttcatccccaaggcctttccaggaggg
cacagtatgatcttggacgctgaagttcttctgattgacaccaggatagggaagcctctg
ccttttgggaccctcggggtgcataagaaagctgctttccaagatgccaatgtctgcctt
tttgtctttgactgcatctatttcaatgatgtcagtctgatggacaggcctctgcgtgag
cgtcgcagatttctccatgataacatggtggaaatccccaaccgaattctcttttcagag
atgaagcatgtcacgaaagcctcagaccttgcagacatgatcaaccgggtcatccgcgaa
gggctggagggattagtgctgaaagatgtgaagagtatttatgaaccaggaaaacgccac
tggctcaaagtgaaaaaggactatctgaacgagggagcaatggcagacacagcagacctg
gtggttttgggtgccttctatggccaggggagcaaaggtgggatgatgtccatctttctc
atggggtgctatgatcctgacagccagaagtggtgcacagtgaccaaatgtgctggtgga
catgatgatgccacacttgcccggctgcagaaggaattggacatggtgaaaatcagcaag
gatcccagtaaaattccagactggctaaagattaataagaattattatcctgatttcatt
gttccagacccaaaggaagcaccagtctgggagatcacaggtgctgaattctctaaagca
gaggcccacactgctgatgggatctccatccgcttcccccggtgtactcgtatccgagat
gacaaagattggacgacgtccactaccctcccacaactcagggagctgtaccagttgtcc
aaagagaaatcggacttcctggtggtagctgcggaggaggagaactctacagcaggcagc
agtggagagactgagggccagcccaagtcatcttctcctcagaaggctgcaaaacaacac
tccgggaagtcccccgcaaaagccaagaagcctgaagtcagcaaaccagtagaaaggtct
ccactgaagaaaactgagggaaagagaggagaaaaaaggaaggcacccgagctggaggcg
gacaaaagaaagcagatgctactggacatattcactggggttaagctttatcttcctcct
tctgtggagggtttcgggaaactcaagcgttatttcatagcctataatggagacctggtt
caagagtatgatgctacttcagcaacccacgtgatggagaggatggaagacaacccaact
gctaagcatgtgtcccctgagtggatttgggaatgcattcgaaagagaaggctggtaact
ccctgctag
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integrated database retrieval system
